Pandoraea faecigallinarum: AB870_20375
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Entry
AB870_20375 CDS
T03972
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pfg
Pandoraea faecigallinarum
Brite
KEGG Orthology (KO) [BR:
pfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfg03021
]
AB870_20375
Transcription machinery [BR:
pfg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AB870_20375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_Crp_2
HTH_20
KORA
Motif
Other DBs
NCBI-ProteinID:
AKM31955
UniProt:
A0A0H3WWD3
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All DBs
Position
1976986..1978074
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AA seq
362 aa
AA seq
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MLKRKRRTSQEEDLAAPETDQDVDDRQSRQDEDVDDAFDEREAEDDDASSSEAGDEGASP
GRKRKAADADDFGTILQAELTADTVQHYLNRISVKPLLTPAEELDYSTRAQAGEFAARQV
MIERNLRLVVSIAKGYLNRGVPLLDLIEEGNLGLMHAIEKFDPGRGFRFSTYATWWIRQS
IERAIMNQARTVRLPVHVIRELNQVLRAKRHLEKSAAYVDGGEQRDARIEDIADLTGKTP
EEITDILALNEHVASLDAPLEIDPGSSLLDLLSDDRSEAPEHEVQHRELEDLMRLWLSRL
STKHRYVIERRFGLNRVEPATLEELADEMGLTRERVRQIQQEALVKLKRYFASNGVRKDA
VL
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagagaaagcgtcgtacttcgcaagaggaagacctcgctgccccggagaccgat
caggacgttgacgatcggcaatcccggcaggatgaggacgtggacgacgctttcgacgag
cgcgaggcggaggacgacgacgcctcgtcgtccgaggccggcgacgaaggggcttccccg
gggcgcaagcgcaaggccgccgacgccgacgacttcggtaccatccttcaggccgaactc
acggccgacaccgttcagcactatctcaatcgcatcagcgtcaagccgctgttgactccc
gcggaagaactcgattactccacgcgcgctcaggccggggagtttgcggcgcgtcaggtc
atgatcgagcgcaacctgcgtctcgtggtgagtatagccaaggggtacctcaatcgcggt
gtgccattgctcgacctgatcgaggagggcaatctcgggttgatgcacgccatcgagaaa
ttcgatccggggcgtgggtttcgtttctcgacgtacgcgacatggtggatacgccagagt
atcgagcgggccatcatgaatcaggcgcgtacggttcgcctgccggtgcatgtcattcgc
gagctcaatcaggtgctgcgtgcgaagcgtcatctggaaaagagtgccgcgtatgtcgat
ggtggcgagcagcgtgacgcgcgaatcgaggatattgccgatctgaccgggaagacacct
gaggagatcaccgacattctcgcgctcaacgagcatgtcgcctcgctcgatgcgccgctc
gagatcgacccgggcagcagtttgctcgatctgctctctgacgaccgcagcgaagcaccg
gagcacgaggtgcagcatcgcgagctggaagacctgatgcgcctgtggctgtcacggctt
tccaccaaacatcgttatgtcatcgagcgccggttcggactcaaccgcgtggaacccgcc
acgttggaggagttggccgacgaaatggggctgacgcgcgaacgcgtgcgccagatccag
caggaggcgcttgtcaagctcaaacgctatttcgcgtcgaacggcgttcgcaaggacgcc
gtgctgtga
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