KEGG   Pandoraea faecigallinarum: AB870_20435
Entry
AB870_20435       CDS       T03972                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
pfg  Pandoraea faecigallinarum
Pathway
pfg02024  Quorum sensing
pfg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pfg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AB870_20435
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AB870_20435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfg03019]
    AB870_20435
   03036 Chromosome and associated proteins [BR:pfg03036]
    AB870_20435
Messenger RNA biogenesis [BR:pfg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     AB870_20435
Chromosome and associated proteins [BR:pfg03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    AB870_20435
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AKM31965
UniProt: A0A0H3WWE5
LinkDB
Position
1991250..1991486
AA seq 78 aa
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARPVNFHPEAEQS
NT seq 237 nt   +upstreamnt  +downstreamnt
atgagcaacaaagggcaacttctacaagacccgtttctgaacgccttgcgtaaggagcat
gttcccgtctcgatctatctggtcaacggtatcaagctgcagggaaacatcgagtcgttc
gaccagtatgtcgtcctgctgcgcaacacggtcacgcaaatggtttacaagcacgccatt
tcgacggtcgttcctgcgcgtccggtgaatttccatccggaagccgagcagtcctga

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