Pandoraea faecigallinarum: AB870_21065
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Entry
AB870_21065 CDS
T03972
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pfg
Pandoraea faecigallinarum
Brite
KEGG Orthology (KO) [BR:
pfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfg03016
]
AB870_21065
Enzymes [BR:
pfg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AB870_21065
Transfer RNA biogenesis [BR:
pfg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AB870_21065
Prokaryotic type
AB870_21065
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AKM32063
UniProt:
A0A0H3WZE3
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All DBs
Position
2130179..2131165
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AA seq
328 aa
AA seq
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MTDPRSQAPRQKLPRFPLDGVLLLDKPLGLSSNDALIRAKRLLQALKAGHTGTLDPLATG
LLPLCFGEATKFSQDLLEADKTYEARVRLGETTTTGDAEGEVLQTRPVTVDEAAIRAVLP
RFTGSISQVPPMYSALKRDGKPLYEYARAGQTLEREARAVTIHRLEVTECALPAANEFTF
RVTCSKGTYVRTLAEDIGEALGCGAHLRALRRTAVGPLTLDGAVTLEDLNALEHAQRVEK
LAPVDALLKSLPAVWLDDTLAKRFNHGQRLRLDDARCPHALRACAHAHVGIEVKVYAEAA
GDMPARLLGVARLDGAGLLTPQRLLRTQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacggacccgcgttcgcaggcaccccgccaaaaactccctcgttttccgctcgacggt
gtattgctgctcgacaagccgttggggctgtcgtccaacgatgcgctgatcagagccaag
cgtttgcttcaggcgttgaaggcgggccataccggcacgctcgatcccctggcgacgggg
ctgctgccgttgtgtttcggcgaggcgacgaagttttcgcaagacctgctcgaagccgac
aagacttacgaggcgcgtgtgcgtcttggcgagacgacgacgacgggcgatgcggaaggg
gaggtattgcaaacgcgtcccgtgacggtggacgaggcagcgattcgcgccgtcttgccg
cgcttcacgggttcgatttcacaggtgccaccgatgtactcggcgctcaagcgcgacggc
aaaccgttgtatgagtatgcgcgtgcggggcagaccctcgagcgcgaggcgcgcgcggtc
acgatccatcggctcgaagtgaccgagtgtgcgttaccggcggcgaatgaattcacgttt
cgcgtgacatgcagcaaaggcacatacgttcgcacgctggcagaggacattggcgaggca
ttgggttgcggcgcgcatttgcgcgccttgcgtcgtacggctgtcgggccgttgacactc
gatggcgctgtgacgctggaagacctgaatgcgctcgaacatgcgcaacgcgtggagaaa
ctcgcgccggtggatgcgctgctgaagtcgctgcctgccgtgtggctcgacgacacgctt
gcgaagcgcttcaaccacggacagcgcttgcgcctggacgatgcgcgctgcccgcatgcg
ctgcgcgcatgtgcgcacgcgcatgtcggcattgaagtgaaggtctacgccgaagccgca
ggcgacatgccggcccgtttgctcggcgtggcccggctcgatggcgcggggttgcttacc
ccgcagcgattgttgaggacgcagtaa
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