KEGG   Plasmodium falciparum HB3: PFHG_00775
Entry
PFHG_00775        CDS       T01052                                 
Name
(Broad) conserved hypothetical protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pfh  Plasmodium falciparum HB3
Pathway
pfh03020  RNA polymerase
pfh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PFHG_00775
  09124 Replication and repair
   03420 Nucleotide excision repair
    PFHG_00775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfh03021]
    PFHG_00775
   03400 DNA repair and recombination proteins [BR:pfh03400]
    PFHG_00775
Transcription machinery [BR:pfh03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     PFHG_00775
DNA repair and recombination proteins [BR:pfh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PFHG_00775
SSDB
Motif
Pfam: RNA_pol_Rpb4
LinkDB
AA seq 132 aa
MANNINGDIKNLDLGPDFKNCKCLNLCELQLILGDQLRLTSKRNEEAQALIKSSYDYANK
FAAIKNRSSIVDIRTNLERIGDLHEYEIAMLVNLLPKTILEARYLIPSLIRLNDETLNSI
LEHLISYKMYVS
NT seq 666 nt   +upstreamnt  +downstreamnt
atggcaaataatatcaatggagatataaaaaatttagaccttggtcctggtatgtttaat
ttttttttttttttttcttttttgtgaatagaacatgaatcacatatatatatatatata
tatatatatatatatataatatatatgtatattttttttttatagattttaagaattgta
aatgtttgaatttatgtgagcttcaattaattttgggagaccagcttcgattaacatcca
agagaaatgaagaagctcaagcgtaaaatgaaataaataaaataaatgaaataaatgaaa
tacataaaatatgtaatcaataaggaatgttatatatatataatatatgtttatttattt
atttatttgtttatttatttatatatatattttatttttttttttttttgaagattgatt
aaatcgtcctatgattatgccaataaatttgctgcaataaaaaatagaagttcaattgtc
gatattagaactaacttagaacgtataggcgatttacatgaatatgaaatagccatgtta
gttaatcttttacctaagaccatattagaagctagatatttaattccttcgttaattcgt
ttaaatgacgaaaccttaaattctattttagaacatcttataagctataaaatgtacgtt
tcttaa

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