Plasmodium falciparum HB3: PFHG_00817
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Entry
PFHG_00817 CDS
T01052
Name
(GenBank) DEAD-box ATP-dependent RNA helicase 15
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
pfh
Plasmodium falciparum HB3
Pathway
pfh03013
Nucleocytoplasmic transport
pfh03015
mRNA surveillance pathway
pfh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PFHG_00817
09122 Translation
03013 Nucleocytoplasmic transport
PFHG_00817
03015 mRNA surveillance pathway
PFHG_00817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfh03019
]
PFHG_00817
03041 Spliceosome [BR:
pfh03041
]
PFHG_00817
Enzymes [BR:
pfh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PFHG_00817
Messenger RNA biogenesis [BR:
pfh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PFHG_00817
Spliceosome [BR:
pfh03041
]
Complex C
Other components
EJC/TREX
PFHG_00817
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
PFHG_00817
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
KOB59064
UniProt:
A0A0L7K852
LinkDB
All DBs
AA seq
457 aa
AA seq
DB search
MASMDHNAQDELVDYEDDENILDSKDVKGNLGNNILNNNNKGGAMRGSYATVHTGGFKDF
FLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQLDTN
ENQDMQDTKEMNNDNNNNGDNKFVRCLGLAHTRELAYQIKNEFDRFSKYLKNVRCEVVYG
GISMNKHIKLFKEDNIPHIIIGTPGRILALIREKYLITDKIQHFVLDECDKCLEKLDMRS
DVQKIFISTPLKKQVMFFSATMAKEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQHYVKL
QEKDKTRKLIEILDALEFNQVIIFVKSVTRAITLDKLLTECNFPSIAIHGGLEQQERIER
YDKFKKFENRILVSTDLFGRGIDIERVNIVINYDMPENSDSYLHRVGRAGRFGTKGLAVT
FVSSQEDTLALNEVQTRFEVAISEMPNKIDCNEYINQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaatggatcataatgctcaagatgaattagtagattatgaagatgatgagaat
atattagatagtaaagatgttaaagggaatttaggaaataatattttaaataataataat
aagggtggagctatgagaggtagttatgcaactgtgcatacaggaggatttaaagatttt
tttttaaaaccagaattattaagagcaataagtgaaagtggttttgagcatccttcagag
gtacagcaagaaactattcccgcagcaattacaggaactgatatcctttgtcaggccaag
agtggtatgggaaaaacagccgtttttgttttatccattttacaacagctagatacgaat
gaaaatcaagatatgcaggacacgaaagaaatgaataatgacaacaataataatggagac
aataaatttgttaggtgtcttggtttagcacatactcgagagttggcctatcaaataaag
aatgaattcgataggtttagtaaatatttaaaaaatgtaagatgtgaagttgtatatgga
ggtatatcaatgaataagcatataaaattatttaaagaagataatattccacatattatt
ataggaacaccaggaagaatattagccttgataagagagaagtatttaattacagataaa
attcaacattttgtattagatgaatgtgataaatgtttagaaaaattagatatgagaagt
gatgttcagaaaatttttatatcaacacctttaaaaaaacaagttatgtttttttcagca
actatggctaaagaaatgagagatgtgtgtaaaaagtttttacaaaatccagtggaaatt
tttattgatgatgaagcaaaattaaaattacacggattattacaacattatgttaaatta
caagaaaaagataaaacaaggaaacttatcgaaatattagatgctttagaattcaaccaa
gttattatctttgttaaatcagttacaagagctatcacattagataaattattaacagaa
tgtaatttcccatccatagctatccatggaggtcttgaacaacaagaaagaatagaaaga
tatgataaatttaaaaaattcgaaaatagaatcctagtatcaacagatctattcggaaga
ggtatcgatattgaaagagttaatattgttatcaattatgatatgccagaaaattcagac
tcttatttacatagagtaggacgtgctggaagatttggtaccaaaggtctagccgttact
tttgtttcttcacaagaagatactttggcattgaatgaagtccaaacaagatttgaagtt
gccatctcagaaatgccaaataaaattgattgtaatgagtacatcaatcaataa
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