KEGG   Plasmodium falciparum HB3: PFHG_01978
Entry
PFHG_01978        CDS       T01052                                 
Name
(GenBank) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pfh  Plasmodium falciparum HB3
Pathway
pfh03030  DNA replication
pfh03410  Base excision repair
pfh03420  Nucleotide excision repair
pfh03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pfh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PFHG_01978
   03410 Base excision repair
    PFHG_01978
   03420 Nucleotide excision repair
    PFHG_01978
   03430 Mismatch repair
    PFHG_01978
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfh03032]
    PFHG_01978
   03400 DNA repair and recombination proteins [BR:pfh03400]
    PFHG_01978
Enzymes [BR:pfh01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     PFHG_01978
    6.5.1.6  DNA ligase (ATP or NAD+)
     PFHG_01978
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     PFHG_01978
DNA replication proteins [BR:pfh03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PFHG_01978
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PFHG_01978
DNA repair and recombination proteins [BR:pfh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PFHG_01978
   NER (nucleotide excision repair)
    Other NER factors
     PFHG_01978
   MMR (mismatch excision repair)
    Other MMR factors
     PFHG_01978
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C ICE2
Other DBs
NCBI-ProteinID: KOB60278
UniProt: A0A0L7KA53
LinkDB
AA seq 912 aa
MNFLILVVLIKMVVCKIINYVRSDYNFMLSFLRTRKIFSHKKIYFNFKVSKNFTKNSSSN
SYSDILKCFSFPRKGTNDKTKENETFEKGEVKEEEEEKDKNVKRKIINESSKNKRAKVKN
ENDVIKKGSLFNCVVREDEKVNDLSSPKFNPVHFNINDLYLSEKDKEKHKFKDSLLFTFL
TNAFNQIEELKGSGTGSKKNVSIILSNIFRVLIYYSPNDLIPAVYITLNKVAPDYLNVEA
GVGEALILKTMSEAYSRTESSIKKDLQQIEDLGIIAENCSCKMRTIFPLPRLTIQSVFHE
LKSIPNLIGSNSQQKKREVIKKLLVSAKTSEAKYIVRFLQQRLRIGVNSATVVQALSYAF
ILTRPSIPDDIIKRGKEINENLINGKLDGTNNLINKSNNKTEEWLTQSGDRNCIKEENLN
DELLSKDDINKCENMDSLINEIRIRNEKINKPNIFYNLIEKVGDTRLLPLFFKELKNIYC
EENNDIDIFECMEKSVKSALCELPNIEIIIQNLLNGDDMNTLSKKCTVKTGIPVQPMLAK
PTKGVQEVLDRFNNVTFTCEYKYDGERAQIHYIDKDNIKIFSRNLETMTEKYPDVIQIIK
DQIGENVKECIIDSEVVAYDIVNNKILPFQVLTTRKRKDVDIENIKVKVCLFPFDLICCN
GIPVIKEPLAVRRKLLYSLLKSKDGVLSYATHSEMNNIEDIDMFLQDAIENNCEGLMVKT
LVENASYEPSRRSLNWLKVKKDYVEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLAAYNSE
TENFQTVCKAGTGFSDEILSTLYETLSEKIIPNKKSYYEVSDKLNPDVWFDAHYVWEVKA
ADLSLSPVHTAAIGIYADDKGIGLRFPRFLRLREDKNAEQATTTQQIVDFYEAQFSSNKN
KNIDYNDDTESE
NT seq 2739 nt   +upstreamnt  +downstreamnt
atgaatttcctaatattagttgtattaattaagatggttgtatgtaaaattattaattat
gttagaagtgattataattttatgctgtcatttttaaggacgagaaaaatatttagtcat
aaaaagatttatttcaattttaaagtttctaagaattttacaaagaattcatcatctaat
agttatagtgatatattaaaatgtttctcttttccaagaaaaggaactaacgataagacg
aaggaaaatgaaacatttgaaaaaggagaagtaaaagaagaagaagaagaaaaagataaa
aacgtcaaaaggaaaattattaatgaaagtagtaaaaataaaagagctaaagttaagaat
gaaaatgatgttataaaaaaagggtcgttatttaattgtgttgtaagagaagatgaaaaa
gtgaatgatttgagctcacctaaatttaatcctgtacattttaatataaatgatttatat
ttatctgaaaaagataaagaaaaacataaatttaaagactccttattatttaccttttta
acaaatgcatttaatcaaatagaagaattaaaaggtagtggtacaggaagtaaaaaaaat
gtatctattatattatcgaatatatttagggttttaatatattatagccctaatgactta
ataccagctgtatatataaccttaaataaagtagctcccgattatttaaatgtcgaagct
ggtgtaggtgaagccttgatattaaaaacgatgtctgaagcatatagtagaacggaaagt
agtataaagaaggatttacaacaaattgaagatttaggaataatagcggagaattgttct
tgtaaaatgagaacaatatttccgttacctcgcttaactatacaatctgtttttcatgag
ctaaaaagtatacctaaccttataggatcaaattcacaacagaagaaaagggaagtcata
aagaaattgttagtaagtgctaaaacatctgaagctaaatatattgtaagatttttacaa
cagcgtttaaggataggtgtaaattctgcaacggtcgtacaagctttgtcatatgccttt
atattaacaagacctagtatacctgatgatattataaaaagagggaaagaaattaatgag
aatttgattaatggtaaattggatggtactaataatttaattaataaatctaataacaag
acggaagagtggctaacccaatcaggtgataggaattgtataaaggaagaaaatttaaat
gatgaattattatcaaaggatgatataaataaatgtgaaaacatggattcattaattaat
gagatacgtattcgaaatgaaaaaataaacaaaccgaatattttttataaccttattgaa
aaggtgggtgacacacgattattaccattattttttaaagaattaaaaaatatatattgt
gaagaaaataatgatattgatatatttgaatgtatggaaaaatcagttaagagtgcttta
tgtgaattacccaatatcgaaataataatacaaaatttattaaatggtgatgatatgaat
accttaagtaaaaaatgtactgttaaaacaggtattcccgttcaacctatgttagcaaaa
ccaactaagggtgttcaagaagtgttggatagatttaataatgttacatttacttgtgaa
tataaatatgatggtgaacgagcacaaatacattatatagataaagataatataaaaata
ttcagtcgaaatttagaaacgatgactgaaaaatatccagatgttatacaaataataaag
gatcaaataggagagaatgtaaaggaatgtattatagatagtgaagttgttgcttatgat
atagttaataataaaatattaccattccaagtcttaactactagaaaaagaaaagatgta
gatatagaaaatattaaagtgaaagtatgtctttttccatttgatttaatatgttgtaat
ggtataccagtaattaaagaacctttagctgttagaaggaaattattatattctttatta
aagtcaaaagatggggtgttatcatatgctacccattctgaaatgaataatatcgaagat
attgatatgttcttacaagatgctatcgaaaataattgtgaaggtttaatggttaagact
ttagtagaaaatgcatcctatgaaccttctaggagatcattaaattggttaaaggtcaag
aaagattatgttgaaggtctttcagattcggttgatttagttccgatagctggttattat
gggaaaggaaaaagaagtggagtatatggagcttttgttttagcagcttataattctgaa
acggaaaattttcaaaccgtttgtaaggcaggtacaggttttagtgatgagatattaagt
acattatatgaaacattaagtgaaaaaattataccaaataaaaaatcgtattacgaagta
tctgacaaattaaatcctgatgtgtggtttgatgctcactatgtatgggaggttaaggca
gcagatttatctttgtcacctgtacatacagcagctattggtatatatgcagatgataaa
ggtattggtttaaggtttcctcgatttttacgtttaagagaagataaaaatgcagaacaa
gcaaccactacacaacaaattgtagatttttatgaggcacaatttagtagtaataaaaat
aaaaatattgattataatgatgatactgaaagtgaataa

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