KEGG   Plasmodium falciparum HB3: PFHG_01985
Entry
PFHG_01985        CDS       T01052                                 
Name
(Broad) predicted protein
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
pfh  Plasmodium falciparum HB3
Pathway
pfh03020  RNA polymerase
pfh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PFHG_01985
  09124 Replication and repair
   03420 Nucleotide excision repair
    PFHG_01985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfh03021]
    PFHG_01985
   03400 DNA repair and recombination proteins [BR:pfh03400]
    PFHG_01985
Transcription machinery [BR:pfh03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     PFHG_01985
DNA repair and recombination proteins [BR:pfh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PFHG_01985
SSDB
Motif
Pfam: RNA_pol_L_2 Thermo-DBP RNA_pol_L HHH_3
LinkDB
AA seq 126 aa
MSVPTLSNKPETVDLLVLAPGEKKVTCTISDKGDCNIFVIKLEDHTIGNLIKIQLCQDPK
VLFAAYRQPHPLQNAIEITIKPKGYAGVKLLSDNVNNILSQVATLKENFAKKIQKYKESN
SYYEDY
NT seq 926 nt   +upstreamnt  +downstreamnt
atgtctgtaccaacattatcaaacaagcctgaaactgttgatttgttggtattagcccca
ggagaaaaaaagtaaaaaaaaagaagaacgttatatagattgtatattaatatatatata
tatatatatatatatatatattgaagtgttattttaattttttgtataataatatgaaca
tataaaaagcatgctcgtgaaattaaaatgaacatgatgaatctataatataatctatgt
tcaaagataaattatgtatacgaataatttttttttattattttcacaaagataatattt
ttaattttccttttttatatagagtaacttgtaccatatctgataaaggagattgtaaca
tctttgtaataaaattggaagatcacactataggaaatttaattaaaatgtaaataaata
aataaatatatatatatatatatataattatatttaagttattcgaaatatcatattatt
ttaataataaatgatatacaatgtatttatatatatatatatatatattttttttttttt
taatatttccatttattgtagacaactctgtcaagaccctaaagttctttttgctgctta
cagacaaccacaccctcttcaaaatgctatagaaattactattaaacctaagggttatgc
aggtgtgaaattattgtcagataatgtaaataacatattatcacaagttgccacattaaa
ggaaaattttgcggtaattcaaaataaataaataaatatataaatataaatatatatata
tatatatatatatgtgtttgtaataaatattattatataaattttgtatatatctcattt
attaatttaatatattttttataattttcttgtagaaaaaaattcaaaaatataaggaaa
gcaattcttattatgaagattactga

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