Plasmodium falciparum HB3: PFHG_01985
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Entry
PFHG_01985 CDS
T01052
Name
(Broad) predicted protein
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
pfh
Plasmodium falciparum HB3
Pathway
pfh03020
RNA polymerase
pfh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PFHG_01985
09124 Replication and repair
03420 Nucleotide excision repair
PFHG_01985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfh03021
]
PFHG_01985
03400 DNA repair and recombination proteins [BR:
pfh03400
]
PFHG_01985
Transcription machinery [BR:
pfh03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
PFHG_01985
DNA repair and recombination proteins [BR:
pfh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PFHG_01985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
Thermo-DBP
RNA_pol_L
HHH_3
Motif
LinkDB
All DBs
AA seq
126 aa
AA seq
DB search
MSVPTLSNKPETVDLLVLAPGEKKVTCTISDKGDCNIFVIKLEDHTIGNLIKIQLCQDPK
VLFAAYRQPHPLQNAIEITIKPKGYAGVKLLSDNVNNILSQVATLKENFAKKIQKYKESN
SYYEDY
NT seq
926 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtaccaacattatcaaacaagcctgaaactgttgatttgttggtattagcccca
ggagaaaaaaagtaaaaaaaaagaagaacgttatatagattgtatattaatatatatata
tatatatatatatatatatattgaagtgttattttaattttttgtataataatatgaaca
tataaaaagcatgctcgtgaaattaaaatgaacatgatgaatctataatataatctatgt
tcaaagataaattatgtatacgaataatttttttttattattttcacaaagataatattt
ttaattttccttttttatatagagtaacttgtaccatatctgataaaggagattgtaaca
tctttgtaataaaattggaagatcacactataggaaatttaattaaaatgtaaataaata
aataaatatatatatatatatatataattatatttaagttattcgaaatatcatattatt
ttaataataaatgatatacaatgtatttatatatatatatatatatattttttttttttt
taatatttccatttattgtagacaactctgtcaagaccctaaagttctttttgctgctta
cagacaaccacaccctcttcaaaatgctatagaaattactattaaacctaagggttatgc
aggtgtgaaattattgtcagataatgtaaataacatattatcacaagttgccacattaaa
ggaaaattttgcggtaattcaaaataaataaataaatatataaatataaatatatatata
tatatatatatatgtgtttgtaataaatattattatataaattttgtatatatctcattt
attaatttaatatattttttataattttcttgtagaaaaaaattcaaaaatataaggaaa
gcaattcttattatgaagattactga
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