KEGG   Plasmodium falciparum HB3: PFHG_02103
Entry
PFHG_02103        CDS       T01052                                 
Name
(GenBank) hypothetical protein
  KO
K12589  exosome complex component RRP42
Organism
pfh  Plasmodium falciparum HB3
Pathway
pfh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pfh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PFHG_02103
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfh03019]
    PFHG_02103
Messenger RNA biogenesis [BR:pfh03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     PFHG_02103
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     PFHG_02103
SSDB
Motif
Pfam: RNase_PH RNase_PH_C MsyB
Other DBs
NCBI-ProteinID: KOB60403
UniProt: A0A0L7KAJ9
LinkDB
AA seq 278 aa
MSSLNYIEDSINCNIRIDGRTLLTYRSIEINKNILVSGDGSSSVINEENNVICGIKLSLI
TPDVDTYDEGNVNLQIDCPASVAANRIKKDHLQTMTTIIYNLCIKNNINKKILCILPGKF
AWSVDINVMVLNAGGGLLDIISIAIYVALKDTFFPIVKPKKEIEEENTFHEISNKDYQLE
IVENEHVNFPYENIPICISIGEINNKYIYDMSKVEEELVQNIFVVAITSKGKCVAFHKLY
GISMEISSILNITENSSKISHTLFDKIHQALDKIHANM
NT seq 837 nt   +upstreamnt  +downstreamnt
atgagctcgttaaattatattgaagacagcattaactgcaatataagaatagatggtcga
accttattaacgtacagatctatagaaataaataaaaacattcttgtgtcaggtgatggg
agtagtagtgtaataaatgaagaaaataatgtaatttgtggaattaagctttctttaata
actcctgatgttgatacatatgatgaaggtaatgtaaacttacaaattgattgtccagca
tctgttgctgctaatagaataaaaaaagatcatttacaaacaatgacaacaattatttat
aatttatgtataaaaaataatataaataaaaaaatattatgtatcctcccaggtaaattt
gcctggagtgttgatataaatgttatggttcttaatgctggaggaggcctattagatatt
attagcatagccatatatgtagctttaaaagatacgtttttccctattgttaaaccaaaa
aaagaaattgaagaagaaaatactttccatgaaatttcaaataaagattatcagctagaa
attgttgaaaatgaacatgtaaattttccatatgaaaatatacctatctgtatatctatt
ggggaaatcaataataaatatatttatgatatgtccaaagtcgaagaagaacttgttcaa
aatattttcgttgtagctattacgtctaaagggaaatgtgtagcattccataaattatat
ggtatatccatggaaatatcatccattttaaatattactgaaaattcctctaaaatttct
catacgctttttgataaaattcatcaagcattggataaaatacacgcaaatatgtag

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