Pyrococcus furiosus COM1: PFC_00385
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Entry
PFC_00385 CDS
T02183
Name
(GenBank) tRNA-splicing endonuclease subunit alpha
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
pfi
Pyrococcus furiosus COM1
Brite
KEGG Orthology (KO) [BR:
pfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfi03016
]
PFC_00385
Enzymes [BR:
pfi01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
PFC_00385
Transfer RNA biogenesis [BR:
pfi03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
PFC_00385
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
tRNA_int_end_N2
DUF434
Motif
Other DBs
NCBI-ProteinID:
AFN03053
UniProt:
I6UZD1
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All DBs
Position
complement(75087..75599)
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AA seq
170 aa
AA seq
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MKTVIEFYLSGDRVYSEREKAINQLHINRGYGELKGKRLFLSLIEAAYLLEKGWIKVLDG
ERELSFYDVVSLGKKKDEDFDVKYLVYKDLRDRGYIVKSALKFGSHYRVYRKGAEHSDWL
VWVVRESQKLSPNDITARARVAHGVRKTMVLAVVDEDGDVVYYKVEWTKF
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagttatagagttctaccttagtggggacagagtgtatagtgagagggagaag
gcgataaaccagcttcacataaataggggatacggggaactaaagggaaaaagattgttc
ctctccctaatagaggccgcatatttattggaaaaggggtggataaaggttttagatgga
gaaagagaactctccttttatgacgtagtctccctgggaaaaaagaaagatgaggatttt
gatgtaaagtatttggtttataaggatcttcgagatcgaggctacatagtaaaatccgcc
ctaaaatttggttctcattatagggtttacagaaaaggggcagagcactctgattggctc
gtttgggttgtgagagaaagccaaaagctttctccaaacgatattacagctagagcaagg
gtagctcatggtgtgagaaaaacaatggttctagccgttgtcgatgaagatggagatgtg
gtctattacaaagtggagtggactaagttctag
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