Pyrococcus furiosus COM1: PFC_05045
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Entry
PFC_05045 CDS
T02183
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pfi
Pyrococcus furiosus COM1
Brite
KEGG Orthology (KO) [BR:
pfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfi03400
]
PFC_05045
DNA repair and recombination proteins [BR:
pfi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
PFC_05045
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF87
HAS-barrel
HerA_C
TrwB_AAD_bind
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
AFN03956
UniProt:
I6UQ31
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Position
914379..916034
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AA seq
551 aa
AA seq
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MEEFVGIVRGEASFTSYEFSINPSANVSFGEFVVTKNRDGDLVLGTVRHVKNVNWLLSSV
KSNFNSLALDIEEYGESLGENEEVVATVRILGKIEGNELVPNRVPIRNGEYVYKASDDLL
QMIYGNDGIEIGTLLLRPNVRIKLDVNELVSRHFAVLAVTGAGKSNAVAVIIKGIVEDVG
GTVVVLDPHGDYVNLRLPETGIDLVNIIDGKIRIEDLDPEELADLIGISSSAQIQRHFLS
LAWETVKHKNQSLGGESLLEALLDLLNEWISRKTIKYWSEKEGRMKSEDLKSERIETIRG
IIFRIRRFLRNYGNIVTSENLVAAIKPGMVNVIDLSPLDENQMKVVVGKFLEAVFEKRVE
YEMARKRFEKETSKKKRDEYEEIMTEIESKYPALAYPILVIVEEAHIFAPQGEENDAMRI
MGRIAREGRKFGVGLGVVSQRPSKLNEDILSQMNTKIILRIVNPRDQDYVLKASEQLSKD
LMDDIAGLGKGEAVIVGQAIKLPALVRIYNFKELRGKAGTGQYGGEDIGILDRWNKMKRN
MVNSLDIDIDF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggaggaattcgttggaattgtaaggggggaagcgagcttcacaagttatgagttttca
ataaatccctccgcaaacgtttcatttggagagtttgtagtcactaaaaatagagatggt
gatctagttctaggtaccgtaaggcatgtaaaaaatgttaactggttattgtcatctgta
aaaagcaattttaactctcttgcattagatatagaggaatatggagaaagtttaggagag
aacgaagaggttgtagcaactgttagaattttaggaaagatcgagggaaatgagcttgtt
ccaaatagagttccaataagaaatggggaatacgtctataaggcttcagatgatctcctt
caaatgatttacgggaatgatggaatagagattggaactttactcttaaggccgaatgtt
agaataaaacttgatgttaacgaactcgtttccagacattttgcagttttagctgttaca
ggtgctggaaagagcaatgcagttgccgtcattataaagggaatagtggaggatgtcgga
gggactgttgtagttttagaccctcatggggactatgtgaacctaagacttcccgagaca
ggaatagatttggtaaatatcattgatggaaagattagaattgaggatctagatccagaa
gagcttgcagatttaattggaatctcttcctcagcccaaattcaaagacacttcttgtct
ttggcttgggaaactgttaaacataaaaatcaaagcctcggaggggagtcacttcttgag
gccctcttggacttattaaacgaatggataagcaggaaaacgataaagtattggagtgaa
aaagaaggaagaatgaaaagtgaagacttaaagagcgaaagaattgaaactattagaggg
ataatatttaggattagaaggtttctaagaaattatggaaacatcgtgaccagtgaaaat
cttgtcgcagcaataaaacctggaatggtcaatgttattgatttgagtccccttgatgaa
aaccagatgaaggttgttgtcggaaagttccttgaagcagtctttgagaagagagttgaa
tatgaaatggccagaaaaaggtttgaaaaagaaacaagtaagaaaaaaagagatgagtac
gaagaaatcatgacagaaatagaaagcaagtatcctgctttagcttatccaattcttgta
atagttgaagaagcccacatctttgctccccaaggagaggaaaacgatgcgatgaggatt
atgggaaggattgcaagagaaggaagaaagtttggcgtgggtttaggtgtagtttcccag
aggccaagtaagcttaatgaggacatactaagtcagatgaacacaaagataatccttaga
atagtcaatcccagggatcaagattacgttctcaaggctagtgagcaactaagcaaagat
ctaatggatgatatagcaggtttagggaagggcgaggccgttattgtgggacaagccatt
aagctaccagcacttgttaggatttataacttcaaagagttaagaggaaaagctggaaca
ggtcaatatggaggagaagatatagggatccttgatagatggaataagatgaagagaaat
atggtgaattcgctagacattgatattgacttttga
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