Pyrococcus furiosus COM1: PFC_05055
Help
Entry
PFC_05055 CDS
T02183
Name
(GenBank) chromosome segregation protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pfi
Pyrococcus furiosus COM1
Brite
KEGG Orthology (KO) [BR:
pfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfi03400
]
PFC_05055
DNA repair and recombination proteins [BR:
pfi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PFC_05055
Archaeal homologous recombinant proteins
PFC_05055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_15
SMC_N
AAA_21
AAA_29
AAA_13
Mce4_CUP1
SbcC_Walker_B
ABC_tran
ABC_ATPase
HMBD
Snapin_Pallidin
DUF5082
DUF6011
DUF1664
RsgA_GTPase
DUF5679
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AFN03958
UniProt:
I6V1L4
LinkDB
All DBs
Position
917333..919981
Genome browser
AA seq
882 aa
AA seq
DB search
MKLERVTVKNFRSHSDTVVEFKEGINLIIGQNGSGKSSLLDAILVGLYWPLRIKDIKKDE
FTKVGARDTYIDLIFEKDGTKYRITRRFLKGYSSGEIHAMKRLVGNEWKHVTEPSSKAIS
AFMEKLIPYNIFLNAIYIRQGQIDAILESDEAREKVVREVLNLDKFETAYKKLSELKKTI
NNRIKEYRDILARTENIEELIKENEQELIQVLQEISKIEEVLPSKRSKVDMLRKEVLRLE
ETKVEIENSERLLEKRRGDKRTLEERIKNTEEYLEKLKEKEKELEEQVKEITSIKKDVDA
YLALKEFKNEYLDKKYKIEKELTRVEELINEIQKRIEELNEKESEKEKLENEKKEILNKL
AILEKDHQLYEEIKAKKENLRQLKEKLGDKSPEDIKKLLEELETKKTTIEEERNEITQRI
GELKNKIGDLKTAIEELKKAKGKCPVCGRELTDEHREELLSKYHLDLNNSKNTLAKLIDR
KSELERELRRIDMEIKRLTPLLTVAEQIRSIEEELNVVNLEKIEKNATEYEKLLEELRTL
EGRIRGLAEDLKKLAPLEKKLAALIHKKQELEKELKELNTKLESFGFKSVEDLDSKLREL
EEIYKRYLTLLNSKKELEITQREIAKAKETLEMSFEELAEVEADIERIEKKLSQLKQKYN
EEEYKKKREEKEELEKELARLEAQKKELEKRRDTIKSTLEKLKAEKENRERVKKEIKDLE
KAKDFTEELIEKVKKYKALAREAALSKIGELASEIFAEFTEGKYSEVVVRAEENKVRLFV
VWEGKERPLTFLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIM
ERYLKKIPQVILVSHDEELKDAADHVIRISLENGSSKVEVVS
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgaagttggagagagtgactgtgaaaaactttaggtctcatagcgatactgttgtagaa
tttaaggagggcattaacttaataattggtcaaaatggatccggaaagagttcccttcta
gatgcaatccttgtcggcctttactggcctctgagaattaaagatatcaaaaaagacgag
ttcacaaaggttggagcaagggacacatacattgacttaatttttgagaaagatggtact
aaatacaggataacccgaagatttttgaaaggttactcctcaggagaaattcatgctatg
aaaaggcttgtaggaaatgaatggaagcatgtaacggagccaagctcaaaggccatatcc
gcttttatggaaaaacttatcccgtacaacatattcctgaatgccatctacatcaggcag
ggacaaattgatgccatacttgagagcgatgaggctagagagaaggttgtcagagaagtt
ttaaatctagacaagtttgagactgcatacaagaagctttccgaactaaagaaaactatc
aacaatagaataaaggagtacagagatatccttgcaaggacagaaaacatagaggagctg
ataaaagaaaatgaacaagagcttattcaagttctccaagagatatcaaagatagaggaa
gtgcttcccagtaaaaggtcaaaggttgatatgcttaggaaagaagtcctaagacttgag
gaaacaaaggtggagatagaaaacagtgagcgtttgctagaaaaaagaagaggagataag
agaactcttgaagagagaataaaaaacactgaggaatacttagagaagttaaaagaaaaa
gaaaaggagcttgaagagcaagttaaagaaatcaccagcataaagaaagatgttgatgca
tatctggccctaaaagagttcaaaaatgagtacctggataaaaaatataagatagaaaaa
gagctgactagagtagaagagctaattaatgagattcagaagagaatcgaggaactcaat
gagaaggaatcagaaaaggagaagctcgaaaacgagaaaaaagaaatactaaacaagcta
gctattctcgaaaaagatcaccaattgtatgaagagataaaagcaaagaaagaaaattta
aggcaattaaaagaaaagcttggagacaagtctcctgaagacattaagaaattactagag
gaactagagactaagaaaacaacaatagaagaggagagaaatgaaataacccagaggatt
ggagaacttaaaaacaaaataggggatctaaaaacggcaatagaagagctcaaaaaagct
aaaggaaagtgtccagtatgtggaagagagttaacggatgagcatagagaagagctacta
tctaaatatcacctcgatcttaacaatagcaaaaatactttagccaaactaatcgataga
aaaagcgagctcgaaagagaacttcgaagaatagatatggaaataaagcgattaacgcct
cttctaacagtagctgaacaaatacgatctattgaagaagaattgaatgtagtgaacctc
gagaaaatagagaaaaatgccacggagtatgaaaagcttttagaagagttgcgcacccta
gagggtagaattaggggccttgcagaagacctgaaaaagctagctcccctagagaagaag
ctggccgctcttatccataaaaagcaagaactagaaaaagaattgaaagagcttaacact
aagctagagtcttttggattcaaatcagttgaagatcttgactctaaactaagagaatta
gaggagatctacaaaaggtatcttaccctgttaaattcaaagaaagaactcgaaataacc
caaagggaaatcgccaaagctaaggaaactttggagatgagcttcgaagaacttgctgaa
gtagaggcggacattgaaaggatagaaaagaaacttagccagctaaaacagaaatacaac
gaagaggaatacaagaagaagagagaagaaaaggaggaactagaaaaagagctggctaga
cttgaagctcaaaagaaagagttagaaaagaggagagacacaataaaatctacgctggaa
aagctaaaagctgaaaaagaaaacagagaaagagtaaagaaagaaattaaagacctagaa
aaagctaaagatttcacagaagagttgattgagaaagttaagaagtacaaggccttggca
agggaggccgctctcagcaagattggagaacttgccagtgaaatattcgcagaatttact
gagggtaagtattcggaagttgtagtgagggccgaagagaataaggtaaggttatttgtt
gtgtgggaaggaaaagaaaggccactaacgtttctcagcggaggggaaaggatagccctt
ggattggcatttaggttggcaatgtccctatacctagcgggagagataagcctcctgatt
ttagatgagccaacgccttatttagatgaggagagaagaagaaagctcatcacgatcatg
gagaggtacttaaagaagattccacaagtaatcctcgtctctcacgatgaagaactcaag
gatgccgcagatcacgtgattaggataagccttgaaaatggatcctccaaggtggaggtg
gtctcttga
DBGET
integrated database retrieval system
