KEGG   Pyrococcus furiosus COM1: PFC_06295
Entry
PFC_06295         CDS       T02183                                 
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
pfi  Pyrococcus furiosus COM1
Pathway
pfi03030  DNA replication
pfi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pfi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PFC_06295
   03410 Base excision repair
    PFC_06295
   03450 Non-homologous end-joining
    PFC_06295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfi03032]
    PFC_06295
   03400 DNA repair and recombination proteins [BR:pfi03400]
    PFC_06295
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pfi04147]
    PFC_06295
DNA replication proteins [BR:pfi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PFC_06295
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PFC_06295
DNA repair and recombination proteins [BR:pfi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PFC_06295
Exosome [BR:pfi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PFC_06295
SSDB
Motif
Pfam: XPG_I XPG_N
Other DBs
NCBI-ProteinID: AFN04195
UniProt: I6UZS7
LinkDB
Position
1127439..1128461
AA seq 340 aa
MGVPIGEIIPRKEIELENLYGKKIAIDALNAIYQFLSTIRQKDGTPLMDSKGRITSHLSG
LFYRTINLMEAGIKPVYVFDGEPPEFKKKELEKRREAREEAEEKWREALEKGEIEEARKY
AQRATRVNEMLIEDAKKLLELMGIPIVQAPSEGEAQAAYMAAKGSVYASASQDYDSLLFG
APRLVRNLTITGKRKLPGKNVYVEIKPELIILEEVLKELKLTREKLIELAILVGTDYNPG
GIKGIGLKKALEIVRHSKDPLAKFQKQSDVDLYAIKEFFLNPPVTDNYNLVWRDPDEEGI
LKFLCDEHDFSEERVKNGLERLKKAIKSGKQSTLESWFKR
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgggtgtcccaattggtgagattataccaagaaaagaaattgagttagaaaacctatac
gggaaaaaaatcgcaatcgacgctcttaatgcaatctaccaatttttgtccacaataaga
cagaaagatggaactccacttatggattcaaagggtagaataacctcccacctaagcggg
ctcttttacaggacaataaacctaatggaggctggaataaaacctgtgtatgtttttgat
ggagaacctccagaattcaaaaagaaagagctcgaaaaaagaagagaagcgagagaggaa
gctgaagaaaagtggagagaagcacttgaaaaaggagagatagaggaagcaagaaaatat
gcccaaagagcaaccagggtaaatgaaatgctcatcgaggatgcaaaaaaactcttagag
cttatgggaattcctatagttcaagcacctagcgagggagaggcccaagctgcatatatg
gccgcaaaggggagcgtgtatgcatcggctagtcaagattacgattccctactttttgga
gctccaagacttgttagaaacttaacaataacaggaaaaagaaagttgcctgggaaaaat
gtctacgtcgagataaagcccgagttgataattttggaggaagtactcaaggaattaaag
ctaacaagagaaaagctcattgaactagcaatcctcgttggaacagactacaacccagga
ggaataaagggcataggccttaaaaaagctttagagattgttagacactcaaaagatccg
ctagcaaagttccaaaagcaaagcgatgtggatttatatgcaataaaagagttcttccta
aacccaccagtcacagataactacaatttagtgtggagagatcccgacgaagagggaata
ctaaagttcttatgtgacgagcatgactttagtgaggaaagagtaaagaatggattagag
aggcttaagaaggcaatcaaaagtggaaaacaatcaacccttgaaagttggttcaagaga
taa

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