Pyrococcus furiosus COM1: PFC_07940
Help
Entry
PFC_07940 CDS
T02183
Name
(GenBank) ATP dependent RNA helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
pfi
Pyrococcus furiosus COM1
Brite
KEGG Orthology (KO) [BR:
pfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfi03019
]
PFC_07940
Messenger RNA biogenesis [BR:
pfi03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
PFC_07940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
DUF5814
Helicase_C
ResIII
DUF4428
DEXQc_Suv3
ATPase
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
AFN04520
UniProt:
I6V0K5
LinkDB
All DBs
Position
1434541..1437051
Genome browser
AA seq
836 aa
AA seq
DB search
MLIVVRPGRKKNELEAFIIENPPEKLSQRRNLKADRVVRLIMRDNRLFKALEGSQYLNPK
EVERALRNSRIVLVNANEWEEYFKKRLMNKRVEKADICRLCLLNGKITVLTEGNRIRYRD
EYICESCAEEELKRELRFRFNSIGMLEQAKKLLERFRDLDKVISIFDPSFDPTKHPEITK
WDELKAKHIRVEKMHIDELNIPEEFKKVLKAEGINELLPVQVLAIKNGLLEGENLLVVSA
TASGKTLIGELAGIPKALKGKKMLFLVPLVALANQKYEDFKRRYSKLGLKVAIRVGMSRI
KTKEEPIVLDTGTDAHIIVGTYEGIDYLLRAGKKIGNVGTVVIDEIHMLDDEERGARLDG
LIARLRKLYSNAQFIGLSATVGNPQELARKLGMKLVLYDERPVDLERHLIIARNESEKWR
YIAKLCKAEAMRKSEKGFKGQTIVFTFSRRRCHELASFLTGQGLKAKAYHSGLPYVQRKL
TEMEFQAQMIDVVVTTAALGAGVDFPASQVIFESLAMGNKWITVREFHQMLGRAGRPQYH
EKGKVYIIVEPGKKYSAQMEGTEDEVALKLLTSPIEPVIVEWSDEFEEDNVLAHACVFNR
LKVIEEVQSLCLGANQSAKNVLEKLMEKGLVKIYGDKVEATPYGRAVSMSFLLPREAEFI
RDNLESTDPIEIAIKLLPFENVYLPGSLQREIESAVRGKISSNIFSSSFASVLEELDKII
PEISPNAAERLFLIYQDFFNCPEQDCTEFAMERIGRKIIDLRREGYEPSKISEHFRKVYA
LILYPGDVFTWLDGIVRKLEAIERIARVFNKRRVVEDTIRVRREIEEGKILKGERR
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgttaatagttgtaagaccaggaagaaaaaagaatgagctcgaggcttttataattgaa
aaccctccagaaaagctctctcaaagaagaaatttaaaagctgatagggtagttaggctc
ataatgagagataatagactttttaaagctcttgaaggaagtcagtatttaaatccaaag
gaagtggagagagcccttagaaattcaaggatagttctggtgaatgccaacgagtgggaa
gagtactttaagaagaggttaatgaacaaaagagttgaaaaagctgacatctgtaggctc
tgccttctcaatgggaagattacagtactcactgagggaaacaggataagatacagagat
gaatacatatgtgaaagttgtgccgaggaggagttgaagagagagttaagatttcgattt
aattccataggaatgcttgaacaggcaaagaagcttttagagagattcagagatttagac
aaggtgatttcaatttttgatccatcctttgaccccactaagcatccagagataacaaaa
tgggatgagctaaaggccaagcatataagggtcgagaagatgcatatagatgagctcaac
atccccgaagaattcaaaaaagttctaaaggccgaaggaataaacgaactactccccgtt
caggtgctagcgattaaaaacggcctcctagagggggagaatttattggtggtttcagca
actgcgagtggaaaaactctaatcggagagcttgcaggtattcctaaggctctaaaggga
aagaaaatgctgttcctagttcctctagtagctttagcaaaccaaaagtacgaggacttc
aagagaagatactcaaagcttggattaaaagtagccattagagtcggaatgagcaggata
aagaccaaggaagagccaatagttctggatactggaacagatgcacacataatagtgggg
acttacgaaggaatagactaccttctcagagctggtaaaaagataggaaacgttggaacg
gttgtaatagatgaaatacacatgctcgatgatgaggagagaggagctaggctagatggg
ctcattgcaaggttaaggaagctctattcaaatgcccaatttattgggctttcagcaacc
gtaggaaaccctcaggagttagccaggaagctagggatgaaactagtgctttacgatgaa
aggcccgttgacttagagaggcatttaataattgcgagaaatgagagtgagaagtggagg
tatatagctaagctgtgcaaagccgaggccatgagaaagagcgagaagggattcaagggg
cagacgatagtatttacattttcaaggagaagatgccatgagcttgcctcattcctaacg
gggcagggattgaaggctaaggcctaccactcgggcctcccctatgttcagagaaagctt
accgaaatggagtttcaagctcaaatgattgatgtagttgtaacaacagctgctttagga
gcgggagttgattttccagcatcccaagtcatcttcgaaagcttggccatgggaaacaag
tggataacagttagggagtttcaccaaatgcttggcagggctggaaggccacagtaccat
gagaaaggtaaagtttacataatagtcgagcctgggaaaaagtactcagctcagatggag
ggaactgaagatgaagtcgccctcaagctcttgacttcacccatagaaccagtaattgtt
gagtggagcgatgaatttgaagaggataatgtcttagctcatgcctgtgtgtttaataga
cttaaagttattgaagaagttcaatccctctgcctgggagcaaaccaaagtgctaaaaat
gttttggaaaaacttatggaaaaggggctcgtcaaaatatatggagataaagttgaagca
accccatatggaagggcggtgagcatgagtttcctacttcctagggaggcagagttcatc
agagataacttggagagcactgatccaattgagatagcaattaaactgctaccgttcgaa
aacgtttacctcccaggatcgctccagagggaaatagagtcagctgttagaggaaagata
agctcaaacatcttttcaagctcctttgcatcagtgctagaagagcttgacaagattata
cccgaaataagcccaaatgctgcagaaaggctattcctaatataccaagatttcttcaac
tgcccagagcaagactgtacggagtttgcaatggagagaattgggagaaagatcattgac
ttaagaagagagggatacgagccctcaaaaatctctgagcactttaggaaggtctatgca
ttaatattataccctggagatgtttttacatggttagacggaattgtgagaaaactcgag
gcaattgaaagaatagcccgagtgttcaataagagaagagtggtagaagacacaatcagg
gttagaagggaaattgaagaaggaaaaattttgaagggtgagagacgatga
DBGET
integrated database retrieval system
