Pandoraea fibrosis: PI93_000260
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Entry
PI93_000260 CDS
T06385
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
pfib
Pandoraea fibrosis
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfib03000
]
PI93_000260 (prpR)
Transcription factors [BR:
pfib03000
]
Prokaryotic type
Helix-turn-helix
Other families
PI93_000260 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
AAA
PAS_7
Mg_chelatase
PAS_8
AAA_2
HTH_29
AAA_16
AAA_3
HTH_23
PAS_4
PAS
ATPase
AAA_30
AAA_7
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
QHF11250
LinkDB
All DBs
Position
complement(72437..74452)
Genome browser
AA seq
671 aa
AA seq
DB search
MPPSLSGAVPPHSGTSAPLDPRARRPGIALVSISRLQTLCETVAPRYTDRARFYSVREGY
GAAVAALQSYVESGAVDVVLAAGSNGAYLRENLSVPVVTVKVNGFDVLSAITRATTTWPD
QPLGLVLHETVSRELDDLGELLKIQLRQRAYRSVDEVQAAVDALAAQGCKVIIGPGMACD
LAQEAGLEHVFLYSLGAVEEAFERSVELARVSREKESKRMRLNTIVAHMRDGVAAFDENG
QLEAVNPAMFSLLDIDAERVATQGARQFELTRKLGPMLRELSDDGVAIEERLAHIDARPF
IVSCVPIYEHGMRSGAVVTVQDAQMAQRIDRSLRTTQRPRHLVAKHELAELVGDSPQIEK
VRRLARTGASHDATVLLTGESGTGKELVAQGIHNASARRGNPFVAFNCAALPEGLIESEL
FGHDEGAFTGARRGGKAGLFEIAHTGTIFLDEIGEMPAALQSRLLRVLQEREVMRLGSGR
PVPIDVRVIAATHRDLNALVAEGRFRADLYFRLNLLQVTLPALRERREDIRLLAQTLLSR
NAAQYGLDATASKRILKALSPLFDRYDWPGNVRELENLLARAAIYLDNDVARHAQTLHEV
FPELLRVSTGKPQPVQQAAEAGATAAPVTYTAALAALEAAGGNRAAASRALGISRTTFWR
LMRSVDQSQTR
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgccccccagcctttccggtgccgtgccaccgcattcaggcacatccgcaccgcttgat
ccccgcgcacgccgtccgggcatcgccctcgtgagcatcagccgattgcagaccctttgt
gagacggtcgcgccgcgctacaccgaccgcgcacgcttttactcggtgcgcgaaggctac
ggtgcggccgtcgccgcgttgcagtcgtatgtggaatccggggctgtcgacgtcgtgctg
gcggcaggatcgaacggcgcgtacctgcgcgaaaacctgtcggtgccggtcgtgaccgtc
aaggtcaatggcttcgacgtcctcagcgcgatcacgcgtgcgaccacaacctggccggat
cagccgctgggcctggtgcttcacgaaacggtgtcgcgcgaactggacgatctgggtgag
ttgctgaagattcagcttcggcagcgcgcttaccgttccgtggacgaagttcaggcggcg
gtcgacgcactggcggcgcaggggtgcaaggtcatcatcggccccgggatggcgtgcgat
ctggcgcaagaggcggggctcgaacacgtcttcctctactcgctcggcgcggtggaagaa
gccttcgagcgatcggtcgagctggcgcgggtgagccgcgagaaggaatcaaaacgcatg
cgtctgaacaccatcgtggcgcacatgcgcgacggtgtcgccgcgtttgacgaaaacgga
caactcgaagcggtgaatcccgcgatgttttcgctgctggacatcgacgccgagcgagtc
gcaacgcagggtgcgcggcaattcgaactgacgcgaaaactcgggccgatgttgcgcgag
ttgtcggacgacggcgtcgccatcgaggagcgtctggcccatatcgacgcccgcccgttc
atcgtgagttgtgtgccgatctacgagcacgggatgcgctcgggcgcggtggtcacggtg
caggacgcgcaaatggcgcagcgcatcgaccgatcgttgcgcacaacgcaacggcccaga
catctggtggcgaaacatgaactggccgaattggtcggcgactcgccgcagatcgaaaag
gtgaggcggctcgcacgcactggcgcatcgcacgatgcaacggtgctgctgaccggcgag
agcggcacgggcaaggaactggtcgcgcagggcattcataacgcgagtgcgcgacgcggc
aatccgttcgtcgccttcaactgcgcagcgcttcccgaggggctcatcgagagcgaactg
ttcggacacgacgagggcgcgttcaccggcgcacggcgcggtggcaaggcggggctgttc
gagatcgcgcacaccggcactatctttctcgacgagatcggcgagatgccggccgccctg
caaagccgattgctgcgcgtgttgcaggaacgcgaggtgatgcggctgggatcggggcgt
ccggtgccgatcgatgtccgggtcattgcggcaacgcatcgcgatctgaacgcgctggtc
gcggaaggtcgctttcgcgcggatctgtatttccggttgaatctattgcaggtgacactg
cccgcattgcgcgaacgtcgcgaggatattcgtctgctcgcgcagacgttactctcgaga
aacgccgcgcagtacgggttggatgccaccgcatcgaaacggattctcaaggcgctctcg
ccgctgttcgatcgctacgactggccgggcaatgtgcgtgagctggagaatttgctggca
cgtgccgcgatctatctcgataacgatgtggcgcgtcacgcgcagacgctgcatgaggta
tttccggagttgttgcgagtttcgacggggaaaccgcaacccgtgcagcaggctgccgaa
gcgggcgcaacggccgcgcctgtcacatacaccgctgcactcgccgcgctggaggctgcg
ggcggtaatcgggccgccgccagccgcgcgctgggcatcagccggacaacgttctggcga
ttgatgcggtctgtcgatcaaagtcagactcgatga
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