Pandoraea fibrosis: PI93_000445
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Entry
PI93_000445 CDS
T06385
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfib
Pandoraea fibrosis
Pathway
pfib02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PI93_000445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfib03021
]
PI93_000445
Transcription machinery [BR:
pfib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PI93_000445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_24
Sigma70_ECF
HTH_23
HTH_IclR
RepL
HTH_40
LacI
MarR_2
Trp_repressor
GerE
HTH_Crp_2
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QHF15495
UniProt:
A0ABX6HZ34
LinkDB
All DBs
Position
complement(112669..113202)
Genome browser
AA seq
177 aa
AA seq
DB search
MRDDTGGRKHDARADASGVATLYHDHHGWLRNWLQRKLGNHGDAADLAHDTFVRLLSKDA
PVCPREPRAFLTVVAQGLVANLHRHRKIEAAYLDALAAQPETVAPDPETRAILLQTLIDI
DRRLDGLPPVVRRVFLMSQLDGLAQRDIADATGISIATVQRHIVKALHACCFGNPAA
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacgacaccgggggacgcaaacacgacgcacgcgccgacgcgtccggcgtggcc
acgctctatcacgatcaccatggctggctgcgcaactggttgcagcgcaagctgggcaat
cacggcgacgccgccgacctcgcgcacgacacgttcgtgcgcctgctcagcaaagacgcc
cccgtctgcccacgcgaaccccgggcgtttctcaccgtcgttgcgcaggggctggtcgcc
aacctgcatcgccatcgcaagatcgaagccgcctatctcgacgcgctcgccgcgcaaccc
gagaccgttgcgcctgatccggaaacccgtgcgatcctgctccagacactcatcgatatc
gaccgacgcctcgacggcctgccgcctgtcgtgcgccgcgtcttcctgatgtcgcaactc
gacggcctcgcgcagcgcgatattgccgacgccaccggcatctccatcgccacggtgcaa
cgccacatcgtcaaggcgctgcacgcgtgctgcttcgggaaccccgccgcatga
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