Pandoraea fibrosis: PI93_000475
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Entry
PI93_000475 CDS
T06385
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
pfib
Pandoraea fibrosis
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfib03000
]
PI93_000475
Transcription factors [BR:
pfib03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PI93_000475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
PBP_like
MarR
PBP_like_2
DUF5635
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
QHF11288
LinkDB
All DBs
Position
complement(124232..125095)
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AA seq
287 aa
AA seq
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MRITQLRSFHAVARHGSVTRAAEALHVSQPTMTTQIRALEETYGVELFYRHGRGLTLTPT
GKALYAVSLRIFADEAEALGLLKEHGGLRTGELRLGAVGPHHAMEIVAAFQPRYPGMRIS
MRPGNSEEMIESLLAYRTDVAVLARYYDDARLHVVPYRTHPVVLLVPRSHPFARHRSVKL
AALADVPMLMREPGSTTRHALEAALQSAGVTPSVAMEIGSREAIREAVILGLGIAAVSAR
EHTPDERLATVAISDARVETTTVVVCLAERRESRAIAAFLEVVAGLV
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcggattacccaattgcgctcgttccacgccgtggcgcgtcatggcagcgtgacacgc
gcagcagaagccctgcatgtcagtcagcccacgatgaccacgcagattcgtgcgctggag
gagacctacggggtcgagctgttctaccggcacgggcgcgggttgacgctgaccccgacc
ggcaaagcgttgtacgccgtgagtctgcgcatctttgccgacgaggccgaggccctcggc
ctgctcaaggagcatggcgggctgcgcacgggggagttacgtctgggtgccgtcggcccg
catcacgcgatggagatcgtggcggccttccagccgcgctatcccggcatgcgcatttcg
atgcgcccgggcaattcggaagagatgatcgagagcctgctggcctatcgcaccgacgtg
gcggtgctcgcgcgctactacgacgacgcccggctgcatgtggtgccctatcgcacgcat
ccggtcgtgctgctcgtgccacgctcgcacccgttcgcgcggcaccgcagcgtgaagctc
gccgcgctggccgacgtgccgatgctcatgcgcgagccgggttcgaccacgcgtcacgca
ctcgaagccgcgttgcagagcgctggcgtgacgccgagcgtggcgatggagatcgggagt
cgcgaagccatccgcgaggcggtaattctgggactggggattgcggcggtgtcggcgcgt
gagcacacccccgacgagcggctcgccacggtggcgatcagcgacgcccgcgtggagacg
accaccgtcgtcgtgtgtctggcggaacggcgcgaatcgcgcgcgatcgcggcgtttctg
gaagtggtggcgggattggtgtga
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