KEGG   Pandoraea fibrosis: PI93_000840
Entry
PI93_000840       CDS       T06385                                 
Symbol
hemN
Name
(GenBank) oxygen-independent coproporphyrinogen III oxidase
  KO
K02495  oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
Organism
pfib  Pandoraea fibrosis
Pathway
pfib00860  Porphyrin metabolism
pfib01100  Metabolic pathways
pfib01110  Biosynthesis of secondary metabolites
pfib01240  Biosynthesis of cofactors
Module
pfib_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:pfib00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    PI93_000840 (hemN)
Enzymes [BR:pfib01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.98  With other, known, physiological acceptors
    1.3.98.3  coproporphyrinogen dehydrogenase
     PI93_000840 (hemN)
SSDB
Motif
Pfam: Radical_SAM HemN_C
Other DBs
NCBI-ProteinID: QHF11352
LinkDB
Position
complement(211075..212442)
AA seq 455 aa
MHVDARLLGRYDVNGPRYTSYPTALQFRDDFGTSDYARAAAQSKRTGKPLSLYLHVPFCD
TVCFYCACTKVVTRNRAHADAYVERLHAEIARQASLLGAGRTLAQMHWGGGTPTFLSLEQ
IASLIDVISRQFSIPPDDSAEYSIEIDPRSAGPASIRALRALGFNRLSIGVQDFDPRVQE
AIHRVQPRALVEATLDAARGCGIRSVNFDLIYGLPHQTPESFSTTLDAVIEMSPERLSVF
SYAHLPQQFKMQRCLPDALPDGPQKLALLQTIITRLTAAGYVYIGMDHFARPDDELARAQ
AAGTLHRNFQGYSTRGDCDLVGVGMSAIGRVGDSYAQNAKTLKTYYEAIDAGGLAVTRGV
RLDEDDVIRRDVISRVMCRMSLDFADIEQSYDIDFVAYFASELGELADLAADGLVAIDAH
GLRVLPAGRLLVRVVAQVFDRYRRSAANARCAKVM
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgcatgtcgatgcgcgactgctcgggcgctacgacgtcaacggaccgcgctacacctcg
tacccaacggcactgcaattccgcgacgacttcggcaccagcgactatgcgcgtgccgcg
gcccagtccaaacgcaccggcaagccgctctcgctctacctccatgtgccgttctgcgac
accgtgtgcttctactgcgcatgcaccaaggttgtcacccgcaatcgcgcccacgccgat
gcctacgtcgaacggctgcacgcggagattgcgcgtcaggcgtcgttgctcggggccggt
cgcacgctcgcgcagatgcattggggtggcggcacccccaccttcctctcgctcgaacag
atcgcctcgctcatcgacgtcatcagccgtcaattctcgatcccccccgacgacagtgcc
gaatactccatcgagatcgatccccgcagcgcgggtccggcgtcgattcgcgccttgcgt
gccttgggattcaatcgcctatccatcggcgttcaggatttcgatcctcgcgttcaggaa
gccattcaccgcgtgcagccacgtgcgctggtcgaagccacgctcgatgccgcaagaggt
tgtggcatccggtccgtcaacttcgacttgatctacggtttgccacatcagacccccgag
tcgttctcgaccacgcttgacgccgtgatcgagatgtcgccggaacgcctttcggtcttc
agctatgcgcacctgccgcagcaattcaagatgcaacgctgcttgcccgacgccttgccc
gacgggccgcaaaagctcgcgctgttacagacgatcattacccggctgacggccgcgggc
tacgtgtacatcggcatggaccacttcgcccgccccgacgacgaactggcgcgtgcccaa
gccgccggcacgctgcatcgcaattttcagggctacagcacgcgcggggattgcgacctc
gtcggggtgggcatgtcggcgatcggccgggtgggcgatagctacgcgcaaaacgcgaag
acgctcaagacgtactacgaagccatcgatgcgggcggactcgccgttacgcgtggcgtg
cgtctcgatgaagacgacgttatccggcgtgacgtcatttcacgcgtgatgtgccgcatg
tcgctggactttgccgacatcgagcagtcatacgacatcgacttcgtcgcctacttcgcg
agcgaactcggcgagttggccgatctggcagccgacggcctcgtcgccatcgatgcccac
gggctacgcgtcctgcctgcggggcgcctattggtacgtgtcgtggcgcaggtcttcgat
cgctatcgccgcagcgcggccaatgcacgttgcgcaaaggtgatgtaa

KEGG   Pandoraea fibrosis: PI93_009245
Entry
PI93_009245       CDS       T06385                                 
Symbol
hemF
Name
(GenBank) oxygen-dependent coproporphyrinogen oxidase
  KO
K00228  coproporphyrinogen III oxidase [EC:1.3.3.3]
Organism
pfib  Pandoraea fibrosis
Pathway
pfib00860  Porphyrin metabolism
pfib01100  Metabolic pathways
pfib01110  Biosynthesis of secondary metabolites
pfib01240  Biosynthesis of cofactors
Module
pfib_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:pfib00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    PI93_009245 (hemF)
Enzymes [BR:pfib01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.3  With oxygen as acceptor
    1.3.3.3  coproporphyrinogen oxidase
     PI93_009245 (hemF)
SSDB
Motif
Pfam: Coprogen_oxidas
Other DBs
NCBI-ProteinID: QHF12810
LinkDB
Position
complement(2063019..2063954)
AA seq 311 aa
MTVQDAAPAPDTGAVRTYLLGLQDRIVETLERLDGKRFFADDWQRPADGALRGDGRTRVL
DDGNFFERGGVNFSHVVGDKLPGSASASRPELAGRGFEALGVSLVLHPRNPYCPTVHFNV
RILIATAPGELPAFWFGGGMDLTPYYPFEEDCQHFHQTCKDALDPFDTTWYPRFKAWCDD
YFYLKHRQEPRGIGGIFFDDFSGGGFDTGFAVMQSVGDAFLDAYVPIIERRRGMPYGERE
RDFQAHRRGRYVEFNLVWDRGTHFGLQSGGRTESILMSMPPIVKWHYDWKPEPDTPEAKL
YTDFLVRREWV
NT seq 936 nt   +upstreamnt  +downstreamnt
atgacagtgcaagacgccgcaccggcgcccgatacgggcgcggtgcgaacttatctgctc
gggcttcaggaccgcattgtcgagacgcttgaacgcctcgacggcaaacgcttcttcgcc
gacgactggcaacgcccggccgacggtgcgctgcgcggtgacggccgtacccgcgtgctc
gacgatggcaacttcttcgagcgcggcggcgtgaatttctcccatgtggtcggcgacaag
ttgccgggctcggccagcgcgtcgcgccccgagctggccggacgcggcttcgaagccctc
ggcgtctcgctggtcctgcatccgcgcaatccgtactgcccgaccgtgcacttcaacgtg
cgcattctgattgcgaccgcgccgggcgagttgccggcgttctggttcggcggtggcatg
gatctcacgccgtactacccgttcgaagaagactgccagcacttccaccagacgtgcaaa
gacgcgctcgatccgttcgacaccacctggtatccgcgcttcaaggcctggtgcgacgac
tacttctatctgaagcaccgtcaggagccgcgcggcatcggcggtatcttcttcgacgac
ttctccgggggcggcttcgatacgggctttgccgtcatgcagagcgtgggcgacgccttc
ctcgatgcctatgtgccgatcatcgagcgccgccgcggcatgccgtatggcgagcgcgag
cgcgattttcaggcgcaccgtcgtggccgttacgtcgaattcaacctggtctgggatcgc
ggcacgcacttcggcctgcaatcgggagggcgtaccgaatccatcctgatgtcgatgcca
ccgatcgtgaaatggcattacgactggaagcccgagccggatacccccgaggcgaagctc
tataccgacttcctcgtgcgccgcgagtgggtgtga

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