Pandoraea fibrosis: PI93_001325
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Entry
PI93_001325 CDS
T06385
Name
(GenBank) TlyA family rRNA (cytidine-2'-O)-methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
pfib
Pandoraea fibrosis
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfib03009
]
PI93_001325
Enzymes [BR:
pfib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
PI93_001325
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
PI93_001325
Ribosome biogenesis [BR:
pfib03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PI93_001325
23S rRNA modification factors
PI93_001325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
TyrRSs_C
SNRNP200_wHTH
Motif
Other DBs
NCBI-ProteinID:
QHF11439
LinkDB
All DBs
Position
319875..320714
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AA seq
279 aa
AA seq
DB search
MSQALRADQALVSRGLAASRTAAQRLIDAGRVYFAGTETALKKASQVVADDEALEVRAAS
DGLPGEDRYVSRGGLKLAGALAQTGLDVTGRVALDVGLSTGGFADCLLQSGIAQVVGVDV
GHGQLHQRLASEPRLVSLEGINARHLSREMLDERLAQRAADDDTRDVAMAATIAVPAAGF
DLIVGDVSFISLTLILPALAPLLAATGDLLMLVKPQFEVGREHIGRGGLVKDAAQYAQVE
TKIRTACEALGLSVAAWLDSPIAGGDGNREFFVHATRAA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagcgcttcgtgccgatcaggcgctcgtttctcgggggctggccgcatcgcgc
accgccgcacaacgtcttatcgatgccggacgcgtgtatttcgccggcactgaaacggcg
ctgaaaaaagccagtcaggttgtggcggacgatgaggccctcgaagtgcgtgcggcgtcg
gacggcttgcccggcgaagatcgctacgtgtcgcgtggtgggttaaagctggccggtgcg
ctggcgcagaccggcctcgacgtcacggggcgtgtcgcgctcgacgttggcctgtcgact
ggcggctttgcggactgtctgttgcagtcgggcatcgcgcaggttgtcggcgtggacgtc
gggcacgggcaactgcatcagcgtctggcgagcgagccgcgcctcgtctcgctcgagggc
atcaacgcgcgtcacctgtcgcgcgagatgctcgacgaacgtctggcgcagcgcgcggcc
gatgacgacacgagggacgtcgcgatggcagcgacgatcgccgtgccggcagcgggcttc
gatctgatcgtcggcgacgtgtcgttcatctcgctcaccttgatactgccggcactcgcg
ccgttgctggctgcgacgggcgatctgctgatgctggtgaaaccgcagttcgaagtgggg
cgcgaacacattggccgcggtggcctcgtgaaagatgctgcgcaatatgcgcaagtggag
acaaagatccgcaccgcctgtgaagcgctgggactgagcgtggccgcctggctcgacagc
cccatcgccgggggtgacggcaaccgggagttcttcgtgcacgccacgcgcgcggcatga
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