Pandoraea fibrosis: PI93_001585
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Entry
PI93_001585 CDS
T06385
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib03420
Nucleotide excision repair
pfib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PI93_001585
03430 Mismatch repair
PI93_001585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfib03400
]
PI93_001585
Enzymes [BR:
pfib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PI93_001585
DNA repair and recombination proteins [BR:
pfib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PI93_001585
MMR (mismatch excision repair)
Other MMR factors
PI93_001585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QHF11483
LinkDB
All DBs
Position
376101..378185
Genome browser
AA seq
694 aa
AA seq
DB search
MSDQPTAPARDPWAELNERQREAVDHGVGNDGAPGGPLLVIAGAGSGKTSTLAHRVARLI
VSGADPNRILLLTFSRRAAGEMERRVGAVLQKVLGLASSQPPSLPWAGTFHAIGARLLRD
FATRIGLSEAFTIHDRSDAEDLLGLARHELGFSNTQSRFPLKGTCLSIYSRVVNSQAPLA
DVLAKHFPWCAQWEAQLKTLFGAYVDAKQAQHVLDYDDLLLYWAETMSAPELARELGERF
DHVLVDEYQDTNRLQAQILLAMKPDGRGLTVVGDDAQSIYAFRAATIRNILDFPGQFAAP
AHVVTLERNYRSTQPILDASNAVIAESSERYAKALWTDRQSTRLPQLVNVSDESGQARWV
ADQVLEQRETGTRLKQQAVLFRTGSHSAALELELTRRNIPFVKFGGLKFLEAAHVKDMLS
VLRWAHNPASRLSGFRVAQLIPGIGPVSATRLLDAMAQSTTPAQVLAEFKPPSAAAADWR
AFVEVFMALHDTRVAWPADVDLALRWYAPLLTQRFDDAAVRQADLEQLARIAGTYGSRES
FLTELTLDPPDATSAQSGVPLLDEDYLILSTIHSAKGQEWHSVYVLNVVDGCIPSDMSTG
DDADIEEERRLLYVAMTRAKESLQLVVPQRFYVHQQTGLGDRHVYGTRSRFVSDKMLPLY
EMLPKPREGEVPRGPVGDVTVHIDVARKLRNAWS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaccagccgactgcccccgcccgcgatccgtgggccgaactcaacgaacgccag
cgcgaggctgtcgaccacggtgtgggtaacgacggcgcgcctggcggtccgctgctcgtc
attgcgggagccggctcgggcaagacgagcaccctcgctcatcgcgtggccaggctgatc
gtgagtggggccgatccgaatcgcattctgttgctcacgttttcgcgtcgcgcggcgggt
gaaatggagcgacgcgtgggcgcggtgctccagaaggtgttggggctggcgtcgtcgcaa
ccgccgtcgctgccgtgggccgggacgtttcacgccatcggtgcgcgtctcttgcgggac
ttcgcaacgcgcatcggcctgtcggaagcgttcaccattcacgaccgcagcgacgccgag
gatctgctgggcctcgcgcgtcacgaactgggtttctccaacacgcagtcgcgcttcccg
ctcaagggcacctgcctgtcgatctactcgcgggtggtgaatagtcaggccccgctcgcc
gacgtgctggcgaagcacttcccgtggtgcgcccaatgggaggcgcaactcaagacgctc
ttcggtgcttatgtcgacgcgaagcaagcgcaacacgttctcgattacgacgacctgctg
ctgtactgggccgagacgatgagtgcgccggaactcgcgcgtgagttgggggagcgcttc
gatcatgtgctcgttgacgagtatcaggacaccaaccgtttgcaggcgcagattctgctg
gcgatgaagcccgatggtcgcggcctgaccgttgtcggcgacgatgcgcagtccatctat
gcgtttcgtgcggccaccatccgcaatattctcgatttccccggccagttcgccgcgccc
gcgcatgtggtcacgctcgaacgtaattaccggtcgacgcagccgattctcgacgcatcc
aatgccgtgatcgccgagtcgagcgagcgctatgcgaaggcactatggaccgatcgtcaa
tcgacgcgtttgccgcaactcgtcaatgtgagcgacgaatccgggcaggcccgctgggtg
gccgatcaggtactggaacaacgcgagaccggcacgcgactgaagcagcaggccgtgttg
ttccgcacgggcagtcacagcgcagcgctcgagctggaactgacgcgccgcaatattccg
ttcgtgaaattcgggggattgaagtttctcgaagcggcacacgtgaaggacatgttgtcg
gtgcttcgctgggcccacaaccccgccagccgcttgtcggggtttcgtgtggcgcagctt
atcccgggcatcggcccggtgagtgcgacgcgtctgctcgacgccatggcgcaatcgacc
acgcccgcgcaagtgctcgcggaattcaagccgccgtcggccgctgcggccgattggcgc
gcgtttgtcgaagtcttcatggcgttgcatgacacgcgtgttgcatggcccgccgacgtc
gatcttgccttgcgctggtacgccccgctgcttacgcagcgcttcgacgatgccgccgtg
cgtcaggcggatctggagcaactcgcacgcattgccggtacctacggctctcgcgagtcg
tttttgaccgaactgacgctcgatcccccggacgcgacgagtgcgcaatcgggtgtgccg
ttgctcgacgaggattatctgattctgtcgaccattcacagcgcgaagggacaggagtgg
cattcggtctatgtgctcaatgttgtcgacggatgcattccctctgatatgagtacgggc
gacgacgccgacatcgaggaggagcggcggctgctgtacgtggcgatgacgcgtgcgaag
gaatcgctgcaactggtcgtgccgcagcggttttacgtgcatcaacaaaccggtctgggc
gatcgccacgtgtatggcacgcgtagccgtttcgtgtccgacaagatgctgccgctctac
gaaatgctcccgaagccacgcgaaggcgaagtgccacgcgggccagtgggcgacgtgact
gtgcacatcgatgtcgcaaggaagcttcgcaatgcatggtcctga
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