KEGG   Pandoraea fibrosis: PI93_001705
Entry
PI93_001705       CDS       T06385                                 
Symbol
alkB
Name
(GenBank) DNA oxidative demethylase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
pfib  Pandoraea fibrosis
Brite
KEGG Orthology (KO) [BR:pfib00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfib03400]
    PI93_001705 (alkB)
Enzymes [BR:pfib01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     PI93_001705 (alkB)
DNA repair and recombination proteins [BR:pfib03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    PI93_001705 (alkB)
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2
Other DBs
NCBI-ProteinID: QHF11503
LinkDB
Position
complement(400578..401231)
AA seq 217 aa
MTLDLFGNDDARHDSPQTDELGPGAFVLRGFAQPQLTTLQADIDAVIAQAPLRHWLTPGG
KRMSVAMTNCGEVGWISDRMGYRYGAHDPLSRQPWPSMPASFEVLAQHAAEAAGYRDFRP
DACLINRYALDARLTLHQDRDERELGAPIVSVSLGLPAIFLWGGLQRSDRTRRVRLAPGD
VVVWGGPSRLAYHGIASVEGSFDAQAVRYNLTFRQAR
NT seq 654 nt   +upstreamnt  +downstreamnt
atgacactcgacctcttcggcaacgacgatgcccgccacgacagcccccagacggacgaa
ctcggcccgggcgctttcgtgttgcgggggtttgcgcagccgcaactgacgaccctgcaa
gcggatatcgacgcggtgattgcgcaggcaccgttgcgtcactggctgacgccggggggc
aagcgcatgtcggtcgccatgacgaattgcggggaagtgggatggatcagcgaccggatg
ggatatcgctacggcgcgcacgatccgctctcgcggcaaccgtggccgtcgatgccggcc
tcgttcgaagtgctcgcgcagcacgccgccgaggcggccggctatcgggacttccggccc
gacgcctgcctcatcaatcgctatgcgctggatgcacggctcacgctgcatcaggatcgc
gacgagcgcgaactgggggcgcccatcgtgtcggtctcgctcggcctgcccgcgattttt
ctgtggggcggcctccagcgcagcgatcgcacacgtcgcgtgcggcttgcgccgggcgac
gtcgtggtatggggcgggccgtcgcgactcgcctatcacggcattgccagcgtcgaaggc
agcttcgacgcgcaagccgtgcgttacaacctcacgttccggcaggcgcgctga

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