Pandoraea fibrosis: PI93_002245
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Entry
PI93_002245 CDS
T06385
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
pfib
Pandoraea fibrosis
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfib03000
]
PI93_002245
Transcription factors [BR:
pfib03000
]
Prokaryotic type
Helix-turn-helix
IclR family
PI93_002245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
MarR
HTH_24
TrmB
Motif
Other DBs
NCBI-ProteinID:
QHF11599
LinkDB
All DBs
Position
516034..516813
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AA seq
259 aa
AA seq
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MDYTVASVDTALSLLSLVGECPGLGVTELAQRAGLNKSRAFRLLATLEQHRWVVREGSPV
TYVLGAQALVLGVAGHEQVNLVKVAHRHLQALNRALNENIQLRVRDGLESLCVARVESTH
ELRVHGVVGNRRPLYVGASGRVLLAFASDDVRAQVLGRPRKRFTAGTLIERDELAAELLN
VRRQDCAVSFGELAPEAVSVAVPVRDASGEVIASLSASGPSSRMTRALLPDISSRLSACA
AEISTALGYQIPVPEALSA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggactacacagtcgcttcggtcgacacagcgctttcgctgctgtcgctggtcggggag
tgccccggtctgggtgtgacggaactggcgcagcgcgccggcctgaacaagtcgcgagcg
tttcgtctgctggcgacgctcgagcagcatcgctgggtggtccgcgagggcagcccggtc
acctacgtgctcggcgcacaggcgctggtgctcggtgtcgcaggccacgagcaggtcaat
ctcgtgaaggtggcgcatcgtcatcttcaggcgctcaaccgtgcactcaacgagaatatc
cagcttcgcgtgcgcgacggtctcgagtcgttgtgcgtggcgcgagtggaatcgacacac
gagttgcgtgtgcatggcgtggtcggcaaccgtcgcccgctgtatgtcggtgcgtcgggg
cgcgtgctgctggcgtttgcgtccgacgacgttcgcgcgcaggtgttgggccgcccgcgc
aagcgtttcacggcaggcacgctcatcgagcgcgacgaactggcggccgagctgcttaac
gtgcgtcgtcaggactgcgcggtgagcttcggcgaactcgcgccggaagcggtgtcggtc
gcagtgccggtgcgcgacgcgtctggcgaagtgatcgcgtcgctgtcggcctccggtccg
tcgtcccgcatgacgcgcgcgctgctgccggacatctcgtcgcgcctgtccgcctgcgct
gccgaaatctccaccgcactgggctatcagatccccgtgccggaagccctgtcggcctga
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