| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pfib00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PI93_004915 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pfib03021]
PI93_004915 (rpoC)
03400 DNA repair and recombination proteins [BR:pfib03400]
PI93_004915 (rpoC)
Enzymes [BR:pfib01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PI93_004915 (rpoC)
Transcription machinery [BR:pfib03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PI93_004915 (rpoC)
DNA repair and recombination proteins [BR:pfib03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PI93_004915 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1114143..1118354
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| AA seq |
1403 aa
MKALLDLFKQVQQDEQFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVLEPGMTPLKRCQIMTEEDYYNKVEEYGDEFRAEM
GAEGVRELLRSIDIDQQVEHLRAELQATGSEAKIKKYAKRLKVLEAFQRSGIKPEWMVLE
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPDIIVRNEKRMLQ
ESVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPT
LKLHQCGLPKLMALELFKPFIFHKLEVMGVATTIKAAKKEVENQTAVVWDILEEVIREHP
IMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLFPANGDPSIVPSQDIVLGLYYATRDKINGRGEGLSFIDVSEVLRAYDNK
EVELASRVNVRITEYTVDPETGEKTPKITLYPTTVGRAILSEILPPGLPFSVLNKSLKKK
EISKLINTAFRRCGLRETVIFVDKLMQSGFRLATRAGISICVDDMLVPTKKEELIGEASK
KVKEYDRQYMSGLVTAQERYNNVVDIWGATGDAVGKAMMEQLSKEKTIDRDGNSVDQESF
NSIYMMADSGARGSSAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVAMKALVEGGEVVEALRDRI
LGRVAVADVVNPETQETVYEAGTLLDEDVVEMIETLGIDEVRVRTPLTCDTRYGLCAACY
GRDLGRGTRVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSIEAKSNGTVR
FSATMRYVTNGRGEQIAISRSGEILITDDHGRERERHKVPYGATLLHLDGAQVKAGAQLG
TWDPLTRPIITEHGGFAKFENVEEGVTVAKQIDDVTGLSTLVVIDPKRRGPASKNVRPQV
KLLDENGVEVKIPGTDHAVTIGFQVGALITIKDGQHVPVGEVLARIPTEAQKTRDITGGL
PRVAELFEARAPKDAGILAEVTGTTSFGKDTKGKQRLVITDLDGNQHEFLIPKEKQVLVH
DGQVVNKGEMIVDGPADPHDILRLQGIEALARYIVDEVQDVYRLQGVKINDKHIEVIVRQ
MLRRVQITDNGDSRFIIGEQVERSDMLDENDAMNAADKRPAQYENVLLGITKASLSTDSF
ISAASFQETTRVLTEAAIMGKKDDLRGLKENVIVGRLIPAGTGLAYHKARKAREMSDRER
HDQIALEEAFAPMPNSVEEPTAE |
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| NT seq |
4212 nt +upstreamnt +downstreamnt
atgaaagctttgctcgatctattcaagcaagtccagcaggacgaacagttcgacgcgatc
aagatcggtctggcttcgccggacaagatccgctcgtggtcgttcggcgaagtgaaaaag
ccggagacgatcaactaccggactttcaagcccgagcgtgacggtctgttctgcgcaaag
atcttcggtccgatcaaggactacgaatgcctttgcggcaagtacaagcgcctgaagcac
cgtggcgtgatctgcgagaagtgcggcgtggaagtcacgctggcgaaggtgcgtcgcgaa
cgcatgggccacattgagctggcctcgccggttgcgcacatctggttcctgaagtcgctc
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgacatcgaacgcgtgctgtac
ttcgaagcctacgtggtcctcgaacctggcatgacgccgctcaagcgttgccagatcatg
acggaagaggattactacaacaaggtcgaggaatacggcgacgaattccgtgccgagatg
ggcgcggaaggcgtgcgcgagctgctgcgctcgatcgacatcgaccagcaggtcgagcat
ctgcgcgccgagctgcaagccacgggctcggaagccaagatcaagaagtacgccaagcgc
ctgaaggtgctcgaggctttccaacgctcgggcatcaagcccgagtggatggtgctcgaa
gtgctgccggtgctcccgcctgagctgcgcccgctggtgccgctcgacggtggccgcttc
gcgacctcggatctgaacgatctgtatcgccgcgtcatcaaccgtaacaaccgtctgaag
cgtctgctcgagctcaaggccccggacatcatcgtgcgcaacgaaaagcgcatgctgcaa
gagtccgtggactcgctgctcgacaacggccgtcgcggtaaggcgatgaccggtgcgaac
aagcgtccgctcaagtcgctggccgacatgatcaagggcaagagcggtcgtttccgtcag
aacttgctgggtaagcgcgttgactactcgggccgttcggtgattaccgtgggcccgacg
ctcaagctgcatcagtgcggtctgcccaagctgatggcgctcgaactcttcaagccgttc
atcttccacaagctggaagtgatgggcgtggccacgaccatcaaggccgcgaagaaggaa
gtcgagaaccagacggcggtggtgtgggacatcctcgaagaggtgatccgcgagcatccg
atcatgctgaaccgcgcaccgacgctgcaccgtctgggtatccaggcgtttgagccggtg
ctgatcgaaggcaaggcaattcagcttcacccgctggtttgcgcggcattcaacgccgac
ttcgacggtgaccagatggccgttcacgtgccgctgtcgctcgaagcgcagatggaagcg
cgtaccctgatgctggcctcgaacaacgtgttgttcccggctaacggcgatccgtcgatc
gtgccgtcgcaggatatcgtgctgggtctgtattacgcgacgcgcgacaagatcaacggc
cgcggcgaaggcctgtcgttcatcgacgtctcggaagtgctgcgtgcgtacgacaacaag
gaagtcgaactggcttcgcgtgtgaacgtgcgtatcacggagtacacggtcgatccggaa
acgggcgaaaagacgccgaagatcacgctgtacccgacgactgtcggccgcgcgattctg
tcggaaattctgccgccgggcctgccgttctcggtgctgaacaagtcgctcaagaagaag
gaaatctcgaagctgatcaacacggcgttccgccgctgcggtctgcgcgagacggtgatc
ttcgtcgacaagctgatgcagtcgggcttccgcctggcaacgcgtgccggtatctcgatc
tgcgtcgacgacatgctcgtgccgacgaagaaggaagagctgatcggcgaagcgtcgaag
aaggtcaaggaatacgaccgtcagtacatgtcgggtctggtcacggcgcaagagcgttac
aacaacgtcgtggacatttggggtgctaccggtgacgccgtgggtaaggcgatgatggag
cagctctcgaaggaaaagacgatcgatcgcgacggtaactccgtggatcaggagtcgttc
aactcgatttacatgatggccgactccggtgctcgcggttcgagcgcccagattcgccag
ctcgccggtatgcgtggcctgatggccaagccggacggctcgattatcgagacgccgatt
accgcgaacttccgcgaaggcctgaacgtgttgcagtacttcatctcgacccacggtgca
cgtaagggtctggccgatacggcactgaagacggcaaactcgggttacctgacgcgtcgt
ctggtcgacgtgacgcaggatttggtcgtggtcgaagacgattgcggcacgagcaacggc
gtggcgatgaaggcgctggtcgagggcggtgaagtggtcgaagccctgcgtgaccgtatc
ctgggtcgcgtggcagtcgccgacgttgtgaatccggaaacgcaggaaacggtgtacgag
gccggcacgctgctggacgaagacgtcgtcgaaatgatcgaaacgctgggtatcgacgaa
gtgcgcgtgcgcacgccgttgacctgcgatacgcgctatggtctgtgcgcagcctgctat
ggccgcgatctgggtcgtggcacgcgcgtgaacgtcggcgaagccgtcggcgtgatcgcc
gcacagtcgatcggcgaaccgggcacgcagctcacgatgcgtacgttccacatcggtggt
gcagcgtcgcgtgcggcagtggcctcgtcgatcgaagccaagtcgaacggtacggttcgc
ttctcggcgaccatgcgttacgtgacgaatggccgtggcgagcagatcgcgatctcgcgt
tcgggcgaaatcctgatcacggacgatcatggccgtgagcgcgagcgtcacaaggtgccg
tatggcgccacgctgctgcatctggacggcgcgcaggtcaaggccggcgcccaactgggt
acgtgggacccgctgacgcgcccgatcattaccgaacacggcggtttcgccaagttcgag
aatgtcgaggaaggtgtcacggttgccaagcagatcgacgatgtgacgggtctgtccacg
ctggtcgtgatcgatccgaagcgtcgtggtccggcgtcgaagaatgtgcgtccgcaggtc
aagctgctcgacgagaatggtgtggaagtgaagatcccggggaccgatcacgctgtgacg
atcggcttccaggtgggcgcactgatcaccatcaaggacggtcagcacgttccggtgggc
gaagtgcttgcacgtatcccgaccgaagcgcagaagacccgcgatattaccgggggtctg
ccgcgtgtggccgagctgttcgaagcgcgtgcaccgaaggacgccggcattctggccgaa
gtcacgggtaccacgtcgttcggtaaggacacgaagggcaagcagcgtctggtcattacc
gatctggacggcaaccagcacgaattcctgattccgaaggaaaagcaggtgctggtgcac
gacggtcaggtggtgaacaagggtgaaatgatcgtggacggcccggccgacccgcatgac
atcctgcgtttgcagggtatcgaagcgctggcacgttacatcgtcgacgaagttcaggac
gtgtatcgcttgcagggtgtgaagatcaacgacaagcacatcgaggtgatcgttcgccag
atgctgcgtcgtgtgcagatcaccgacaacggcgattcgcgcttcatcatcggtgaacag
gtcgaacgttcggacatgcttgacgagaacgacgccatgaacgccgcggacaagcgtccg
gcgcagtacgaaaacgtgttgctgggtattacgaaggcgtcgctgtcgacggattcgttc
atctcggccgcatcgttccaggaaacgacgcgcgtgttgaccgaagccgccatcatgggc
aagaaggacgacctgcgtggcctgaaggaaaacgtcatcgtcggccgtctgatcccggca
ggtacgggtctggcatatcacaaggcccgcaaggcccgtgagatgtcggatcgcgagcgt
cacgaccagatcgctctggaagaggcgtttgctccgatgccgaactcggtggaagagcct
acggctgagtaa |
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