Pandoraea fibrosis: PI93_005185
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Entry
PI93_005185 CDS
T06385
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PI93_005185 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfib03021
]
PI93_005185 (rpoA)
03400 DNA repair and recombination proteins [BR:
pfib03400
]
PI93_005185 (rpoA)
Enzymes [BR:
pfib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PI93_005185 (rpoA)
Transcription machinery [BR:
pfib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PI93_005185 (rpoA)
DNA repair and recombination proteins [BR:
pfib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PI93_005185 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QHF12111
LinkDB
All DBs
Position
1161364..1162341
Genome browser
AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVEPVGEHHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTIDGVQEDVVNFLLNLKGVVFKLHNRDEVTVTLRKDGEGVVRASDIEVPHDVEL
INPDHVIAHLAKGGKLDVQIKIEKGRGYVPGNVRRYGDDSAKVIGRIVLDASFSPVKRVS
YAVESARVEQRTDLDKLVMNIETNGVVSPEEAIRQSARILVDQLSVFAALEGTEAASEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLEK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgttgaagcccaagattatcgcggttgagccggtcggtgagcatcac
gccaaagtcgtgatggagccgttcgaacgtggctacggccacaccttgggcaacgcgctt
cgccgcgtgctgttgtcgtcgatggtgggctacgcgccgaccgaagtgacgatcgccggc
gttgtgcatgaatactccaccatcgacggtgtccaggaagatgtcgtcaacttcctgctg
aacctgaagggtgtcgtgttcaagctgcataaccgtgacgaagtcaccgttacgctgcgc
aaggatggtgaaggtgtggtgcgcgcttcggatatcgaagtgccgcatgatgtggaactg
atcaaccccgatcacgtgatcgcgcatctggccaagggcggcaagctcgacgttcagatc
aagatcgaaaagggtcgtggttatgtcccgggtaacgtgcgccgttatggcgatgactcg
gccaaggtgattggccgtatcgtcctcgacgcgtcgttctcgccggtcaagcgtgtgagc
tatgcggtcgaatcggcccgcgtggaacagcgcacggacctggacaagctcgtgatgaac
atcgaaaccaacggtgtggtgtcgccggaagaagcgatccgtcaatcggctcgcatcctc
gtcgaccaactgtcggtgttcgctgcgctggaaggcacggaagccgccagcgaagcgccg
tcgcgtgcgccgcagatcgatccgatcctgctgcgtccggtggacgatctcgagttgacg
gtgcgttcggccaactgcctgaaggccgaaaacatctactacatcggcgacctgatccag
cgtaccgagaacgaattgctcaagaccccgaatctgggtcgcaagtcgctcaacgagatc
aaggaagtgcttgcctcgcgtggtctcacgctgggcatgaagctcgaaaactggccgccg
gctggtctcgagaagtaa
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