Pandoraea fibrosis: PI93_005720
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Entry
PI93_005720 CDS
T06385
Name
(GenBank) GAF domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pfib
Pandoraea fibrosis
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfib03000
]
PI93_005720
Transcription factors [BR:
pfib03000
]
Prokaryotic type
Helix-turn-helix
Other families
PI93_005720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
HTH_30
AAA_5
PAS_4
HTH_23
PAS_8
PAS_9
HTH_50
Mg_chelatase
HTH_29
HTH_22
HTH_7
NACHT
HTH_28
IclR
AAA_2
HTH_1
HTH_17
HTH_psq
RWP-RK
HTH_38
HTH_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
QHF12203
LinkDB
All DBs
Position
1279044..1280948
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AA seq
634 aa
AA seq
DB search
MPANTQSAHARRVLNVVQGHASHGAAATDPNIADSWRRCLDTHALDPGARMAPRVLESAQ
LRERRNAMERLRNVSTPVLERLQRQLMNPHQAVLLTAPDGVIVDSRLHDGKRDDFLRAGL
WPGADWSESCEGTNGIGTCVVERAPVIICQQDHFRALHTPLTCTASPVFAPQGDLLAVID
VSSTSADLTRQSQFHTLALVNLSAKVVESEYFFLHYRDEWLLQLQEQADHLGGFAQALIA
FDDTGRVLAANQSALNRLGATRDEIVGTRVDRWFAQTLDALLAQAHPTPSTCWPIRTQAG
EPLLAMVSAPLRAVRRVSRLPTPAQETTAPAFSDPALAREFSRACRVFAHDVPVLIRGET
GSGKEVFARAVHMASARANGPFVALNCAAIPESLIESELFGYVGGSFTGARKEGMNGKLW
QANGGTLFLDEIGDMPFAMQTRLLRVLEDRRVSPLGGGEPVPLDIRILSATHRNLAERIA
ERQFREDLFYRLSGLEVGVPPLRERADKIDLIQRLLAQACEQGRITLTDAAQDRLCAYAW
PGNVRQMRSVIRTLVALSENGVITLDDLPDELREAAPVLSVAAPTEAPLEAAERQALRAT
LDACQGQVSAAARKLGVSRNTLYRKLKRFGLLRG
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgccagccaatacacagtcagcacatgcgcgtcgtgtgctcaatgtcgtacagggtcat
gcgtcgcacggcgctgccgcgaccgacccgaacatcgccgattcctggcgtcgctgtctg
gacacccacgcgctcgatccgggcgcgcgcatggcgccacgtgtgctggagtcggcgcaa
ctgcgcgagcgccgaaacgcgatggagcgcttgcgcaacgtgtccaccccggtgcttgag
cgtttgcaacgtcagttgatgaatccgcatcaggccgtgttactcaccgcacccgacggc
gtcatcgtcgactcccggcttcacgacggcaagcgcgacgacttccttcgcgcagggcta
tggccgggcgccgactggagcgagtcgtgcgaaggcaccaacggcatcggtacctgcgtg
gtcgaacgcgccccggtcatcatctgtcagcaggaccactttcgcgcgctgcacacgccc
cttacctgcacggcaagtcccgtattcgccccgcaaggcgatctgctcgccgtgatcgac
gtatcgtccacaagcgccgatctcacacgacagagccaattccatacgctcgcgctcgtg
aatctgtcggcgaaggtcgtggagagcgaatatttctttcttcactatcgtgacgaatgg
ctgctgcaattgcaggagcaggccgatcatctcggcggctttgcgcaagcgctgatcgcc
ttcgacgacaccgggcgcgtgctggccgccaaccaaagcgcattgaatcgcctgggcgcg
acgcgcgacgagatcgtcggcacccgcgtggatcgctggttcgcgcagacgctcgatgcg
ctgttggcacaagcgcaccccacgccgagcacgtgttggccgattcgcacgcaggccggc
gagccgttgctggcgatggtgagtgcacccttgcgtgcggtacggcgcgtgagccgtctg
ccgacgcccgcgcaagagacgacggcccctgcgttttccgacccggcgttggcgcgcgag
ttttcgcgcgcttgccgggtcttcgcacatgatgtcccggttctcattcgcggcgaaacg
ggcagtggcaaagaggtcttcgcgcgcgccgtgcacatggcaagcgcgagagcgaatggt
ccgttcgttgcgctgaattgcgcggcgatccccgagtcgctgatcgagagcgagcttttc
ggctacgtgggaggcagcttcactggcgcgcgcaaagaggggatgaacggcaagctgtgg
caagcgaacggcggcacgctgtttctggacgagatcggcgacatgccgttcgcgatgcaa
acccggctgctgcgcgtgctcgaagaccgcagggtgtccccattggggggcggcgaaccg
gtgccgctcgacattcgcatcctcagcgcaacgcaccgcaaccttgccgagcgtatcgcc
gagcggcaattccgcgaggatctcttttatcgtctgagtggattggaagttggcgtgccg
ccgctgcgcgagcgtgcagacaagatcgacctgattcagcggctgttggcgcaggcctgc
gaacaaggcaggatcaccctgacggacgccgcacaagaccggctctgcgcttatgcgtgg
ccggggaatgtgcggcagatgcgcagcgtcattcgcacactggtcgcgctgagcgagaac
ggtgtcatcacgctggatgacctgccggacgagttgcgcgaagcggcgccggtcttgagc
gtcgcagcgccgacagaggcgccgctggaggcggcggagcgtcaggccctgcgcgccacg
ctcgatgcctgccaggggcaggttagcgctgcggcgcgcaagctcggggtcagtcgcaac
acgctgtaccggaagctgaagcgcttcggcctgctgcgtggctga
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