Pandoraea fibrosis: PI93_006035
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Entry
PI93_006035 CDS
T06385
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PI93_006035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfib03400
]
PI93_006035
Enzymes [BR:
pfib01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PI93_006035
DNA repair and recombination proteins [BR:
pfib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PI93_006035
Prokaryotic type
PI93_006035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
AT_hook
Motif
Other DBs
NCBI-ProteinID:
QHF12252
UniProt:
A0ABX6HMZ5
LinkDB
All DBs
Position
complement(1350331..1351329)
Genome browser
AA seq
332 aa
AA seq
DB search
MTSRSRVASPTKHDERQGSLFDEPASVAPTDDATAPSKTTAPASEAPAVPPRRRGRPPKS
AASSSASATPAPKPPSKLVAAASSDAGGAKAAGPLKGRVEDQFDALPADWKTLVSPFVRS
DAYAPLCRFVDAEVAAGKTVYPADIFHALRMTSPGDVKVVILGQDPYHGDDHGIAQAHGM
AFSVQRGVRVPPSLRNIYKEIERDLGISPPSHGHLDAWAKQGVLLLNTTLTVEAANAASH
AKPFKTGGWQACTDTLLCGLAAQQGPLVFLLWGSHAQAKAPLLAGHGHLLLEAPHPSPLS
AHRGFLGCGHFSAANAFLAQHGKTPIDWRVPE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacatcacgctcacgcgtcgcctccccgacaaaacacgatgaacggcagggctcgttg
tttgacgaacccgcgtccgtagcccccacggacgacgcaaccgcgccgtcgaaaacaact
gcccccgcctccgaagccccggccgtaccgccacgccgtcgcggacgcccgccgaagtcg
gcggcgtcttcatctgcatcggcgacaccggcgccgaagccaccctcaaagctggtcgcc
gccgcgagctccgacgctggcggcgccaaagccgccgggccgctcaaaggacgtgtcgaa
gatcagttcgacgccttgcccgccgactggaaaacgcttgtctcgccgttcgtgcgtagc
gacgcctacgcgcccctatgccgttttgtcgacgccgaagtcgccgccggcaagaccgtc
tatccggcggatatcttccacgcgcttcgcatgacatcgccgggcgacgtcaaggtcgtc
atcctcgggcaagatccctatcacggcgacgaccacggcatcgcgcaggcacatggcatg
gcgttctcggtacaacgcggggttcgcgtgccgccgtcgctgcgcaacatctacaaggag
atcgagcgcgatctcggtatctccccgccgtcgcacggccatctcgacgcctgggcgaaa
cagggcgtgctgctgctcaacaccacgctgacggtagaagccgccaacgcggcaagtcac
gccaaaccgttcaagaccgggggctggcaagcgtgcaccgatacgctgctctgcggcctc
gccgcgcagcaggggccgctggtcttcctgctgtggggaagccatgcgcaggccaaagcg
ccgctgctggccgggcacggccatctgctgctcgaagcgccgcacccgtcccccctctcc
gcccatcgcggttttctcggttgcggccacttcagcgccgccaacgccttcctcgcacaa
cacggcaagacgcccatcgactggcgagtgcccgagtaa
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