Pandoraea fibrosis: PI93_006265
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Entry
PI93_006265 CDS
T06385
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib00470
D-Amino acid metabolism
pfib00550
Peptidoglycan biosynthesis
pfib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PI93_006265
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PI93_006265
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfib01011
]
PI93_006265
Enzymes [BR:
pfib01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PI93_006265
Peptidoglycan biosynthesis and degradation proteins [BR:
pfib01011
]
Precursor biosynthesis
Amino acid ligase
PI93_006265
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
DUF364
2-Hacid_dh_C
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
QHF12287
UniProt:
A0ABX6HNW5
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All DBs
Position
1406599..1408125
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AA seq
508 aa
AA seq
DB search
MFGEKFGESWQPRVLILGLGESGLAMARWCARYGCRVRAADTRFASSETPPNVATLRLDA
PQAEFIGGAFAGQVDALLDDIELIGISPGLSPLSPDVAPLLAEAAERGVPVWGEIEFFAQ
ALRHMQSTSGYAPKLLAITGTNGKTTTTSLTGLLCRRAGKRTAVAGNISPTALDRLTECI
ADATLPDVWVLELSSFQLETTHSLAPDAAAILNITQDHLDWHGDMDAYAGAKARIFSEQT
VRVLNREDARVMAFAAPEANVVTFGTSKPDAVGDFGLEMEGGMWWLVEGITRDDAPPAPK
RRKAGAVEAAVEVYSKRLMPADALRIRGQHNAANALAALALARAIDLPMAKLLHGLREYP
GEPHRVQLIGTLNEVEFYDDSKGTNVGATVAAITGLQKTLLLIVGGEGKGQDFSPLANPV
AHHARAVLLIGRDAPLLREALTDTGVELIDAPTLEDATREAARLAQPGDAVLLSPACASF
DMFRNYEHRAQVFRDTVVDLAADAGVML
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtgttcggcgagaagtttggtgaatcctggcaaccgcgtgtcctgatcctgggtctggga
gagtccggcctggcgatggcgcgttggtgcgcgcgttacggctgccgtgtgcgggcggcc
gatacgcgttttgcgtcgtcggagacaccgccgaacgtggcgacattgcgcctggacgcg
ccgcaagccgaattcatcggcggcgcgtttgccgggcaagtcgatgcgctgctcgacgac
atcgaactgatcggcatcagtccgggcctctcgccgctgtcgcccgatgtggcgccgttg
ctcgccgaggctgccgagcgcggcgttcccgtgtggggcgagatcgaattcttcgcgcag
gcgctgcgtcacatgcagtcgacgagcggctatgcgcccaagctgctggccattaccggt
acgaacggcaagaccacgaccacgagtctgaccgggttgttgtgccgacgcgccggaaag
cgcacggccgtagcgggcaacatcagcccgacggcgcttgatcgtttgaccgagtgcatt
gccgacgccacgctgcccgacgtctgggtgctcgaactctccagcttccagctcgagacg
acacactctctcgcgcccgatgcggccgcgattctcaatatcacgcaagaccatctggac
tggcacggcgacatggacgcctacgccggcgccaaggcgcgcatcttcagcgagcagacg
gttcgcgtgctcaaccgcgaggacgcacgtgtgatggcgtttgcggcgcccgaggccaac
gtggtgacgttcggcacgagcaagcccgatgccgttggcgacttcggtctggagatggaa
ggcggcatgtggtggctggtcgaaggcatcacgcgcgacgacgcgccgccggccccgaag
cgtcgcaaggcgggggccgtggaagcggcggtcgaggtgtacagcaagcgtctcatgccg
gccgacgccctgcgtatccgcggtcagcacaacgccgcgaatgcgctggcggcgctggca
ctggcccgcgccatcgatctgccgatggccaagctgctgcacggcctgcgcgaatacccg
ggtgagccgcatcgtgtgcagctcatcggcacgctcaacgaagtcgagttctacgacgac
agcaagggcaccaatgttggcgccaccgtcgcggccatcacgggcctgcaaaagacgctg
ctgctgatcgtcggtggcgagggcaaggggcaggacttctcgccgctggccaatccggtg
gcgcatcatgcgcgcgccgtgctgctgatcggccgcgacgcgccgttgctgcgcgaagcc
ctgaccgataccggtgtcgaactgatcgacgccccgacgctcgaagacgccacgcgagaa
gccgccagactggcccagccgggcgacgcagtgttgctctcgcccgcgtgcgcgagcttc
gacatgttccgcaactacgagcatcgcgcgcaggtgttccgcgacaccgtggttgatctg
gccgccgacgcaggggtgatgctatga
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