Pandoraea fibrosis: PI93_006825
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Entry
PI93_006825 CDS
T06385
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pfib
Pandoraea fibrosis
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfib03016
]
PI93_006825 (miaB)
Enzymes [BR:
pfib01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
PI93_006825 (miaB)
Transfer RNA biogenesis [BR:
pfib03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
PI93_006825 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
QHF12388
LinkDB
All DBs
Position
complement(1527808..1529151)
Genome browser
AA seq
447 aa
AA seq
DB search
MAKKIYIKTFGCQMNEYDSDKMADVLGAAEGLEKTDSPEDADVILFNTCSVREKAQEKVF
SDLGRMRALKEIKPDLVIGVGGCVASQEGAAIVQRAPYVDVVFGPQTLHRLPQMLEARRT
TGRSQVDISFPEIEKFDHLPPAKVEGATAFVSIMEGCSKYCSYCVVPYTRGDEVSRPFED
VLTEIAGLAEQGVREITLLGQNVNAYRGLMADGEIADFALLIEYVAEVPGIERIRYTTSH
PKEFTQRLIDTYAKVPKLVSHLHLPVQHGADRVLSAMKRGYTVLEYKSIIRRLRQVRPDM
SMSSDFIVGFPGETEEDFDKLMAMIHDIGYDTSFSFIYSPRPGTPAANLPDDTPREVKLR
RLQHLQAVIEENAARISQRMVGSRQRILVEGVSRKDPNELQGRTENNRVVNFPVPEAQRA
SLIGQMTDVVITFAYPHSLRGELVTTH
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaagatttatatcaagacgttcggctgtcagatgaacgagtacgactccgac
aagatggcggacgtgctcggcgcagccgaaggtctcgaaaagaccgattcccccgaagac
gccgacgtcatcctgttcaatacgtgctccgtgcgcgaaaaggcacaggaaaaggtgttc
tcggatctgggccgcatgcgcgccctcaaggagatcaagccggatctggtcatcggcgta
ggcggctgtgtcgccagtcaggaaggcgccgccatcgtgcaacgtgcgccctacgtagac
gtggtattcggcccgcaaacgctgcaccgtctgccgcagatgctcgaagcgcgccgcacc
acgggccgctcgcaggtcgacatctcgttcccggaaatcgagaagttcgaccacctgccg
ccggccaaggtcgagggcgccacggcgttcgtctcgatcatggaaggctgttcgaagtat
tgcagctactgcgtggtgccctacacgcgtggcgacgaagtatcgcgcccgttcgaagac
gtgctcaccgagattgccggtctggccgaacaaggcgtgcgcgaaatcacgctgctgggt
cagaacgtgaacgcctatcgaggcctgatggccgacggcgaaatcgccgacttcgcgctg
ctcatcgaatacgtcgccgaagtgcccggcatcgagcgtatccgctacacgaccagccac
ccgaaggaattcacgcagcgtctgatcgacacctacgccaaggtgcccaagctcgtgagc
catctgcacctgcccgtgcagcacggcgccgaccgcgtgctctcggcgatgaaacgcggc
tataccgtgctcgaatacaagtcgatcattcgccgcctgcgtcaggtgcgcccggacatg
tcgatgtcgtcggacttcatcgtcggcttccccggcgagacggaagaggatttcgacaag
ctcatggcgatgatccacgacatcggctacgacacgagcttctcgttcatctacagcccg
cgccctggcacgcccgctgccaacctgccggacgacacgccgcgcgaggtcaagctgcgc
cgcctgcaacatctgcaagccgtgatcgaggaaaatgctgcgcgcatcagccagcgcatg
gtcggctcgcgtcagcgcattctcgtcgaaggcgtctcgcgcaaggacccgaacgagctg
caagggcgcaccgagaacaatcgcgtggtgaacttccccgtgcccgaggcgcaacgcgcc
agcctgatcggccagatgaccgacgtggtaatcaccttcgcctacccgcactcgttgcgt
ggcgaactggtcaccacgcactaa
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