Pandoraea fibrosis: PI93_009175
Help
Entry
PI93_009175 CDS
T06385
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib00521
Streptomycin biosynthesis
pfib00523
Polyketide sugar unit biosynthesis
pfib00525
Acarbose and validamycin biosynthesis
pfib00541
Biosynthesis of various nucleotide sugars
pfib01100
Metabolic pathways
pfib01110
Biosynthesis of secondary metabolites
pfib01250
Biosynthesis of nucleotide sugars
Module
pfib_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PI93_009175 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PI93_009175 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
PI93_009175 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PI93_009175 (rfbB)
00525 Acarbose and validamycin biosynthesis
PI93_009175 (rfbB)
Enzymes [BR:
pfib01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
PI93_009175 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QHF12796
LinkDB
All DBs
Position
2049681..2050745
Genome browser
AA seq
354 aa
AA seq
DB search
MIFVTGGAGFIGANFVLDWLVQHDEPVVTIDKLTYAGNLANLASLERDPRHHFAQVDICD
RAALDRLYAEHRPRAVLHFAAESHVDRSIHGPGDFVQTNIVGTFTMLEAARAYWGTLDDE
ARDTFRFLHVSTDEVYGSLSPTDPAFTETTPYAPNSPYSASKAGSDHLVRAYHHTYGLPT
LTTNCSNNYGPYQFPEKLIPLVIANALAGKPLPIYGDGSNVRDWLYVGDHCSAIREVLAK
GTLGEVYNVGGWNEQNNLSVVKHLCTLLDELSPRADGKSYVDQITFVTDRPGHDRRYAID
ARKLERELGWRPAETFETGMRKTVQWYLANAEWVRQVQSGEYQRWIETHYQKND
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcgtaactggcggcgccgggttcatcggtgcaaatttcgttctcgactggctg
gtgcaacatgacgagcctgtcgtgaccatcgacaagctgacctacgccggcaatctggcg
aatctggcgagtctggagcgcgatccgcgtcatcactttgcgcaagtcgatatttgcgat
cgtgccgcactggatcgactgtatgcggagcatcgtccgcgcgccgtattgcattttgca
gcggaaagccacgttgaccgctccatccatggccccggcgactttgtgcagacgaatatc
gtcggcacgttcacgatgcttgaggcggcgcgagcctattggggaacgctcgacgacgag
gcgcgcgacaccttccgcttcctgcatgtttcgacggacgaagtctatggctcgctgagc
ccgaccgatccggcattcaccgagacgaccccatatgccccgaacagcccgtactcggcg
tcgaaggcgggctccgatcaccttgtgcgtgcctaccatcacacctacggtctgccgacg
ctgacgaccaactgctcgaacaactacggtccatatcaattcccggaaaagctcattccg
ctggtgatcgcgaatgcactggccggaaagccgttgccgatctatggcgacggcagcaat
gtgcgcgattggctgtacgtcggcgaccactgctcggcaattcgcgaggtgctggccaag
gggaccttgggtgaggtgtacaacgtcggcggctggaacgaacagaacaatctgtcggtg
gtcaagcacctgtgcacattgctcgacgagctgtcgccgcgtgcggatggcaagtcatac
gttgatcaaatcactttcgtgacggaccgcccgggacatgatcgccgctatgcgatcgat
gcccgcaaactcgaacgcgagttgggctggcgcccggccgagacgttcgagacgggcatg
cgcaagacggtgcagtggtatctcgccaatgcggagtgggtgcgccaggtacagtcgggt
gagtaccagcgctggattgaaacgcactatcaaaagaacgactga
DBGET
integrated database retrieval system