Pandoraea fibrosis: PI93_009185
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Entry
PI93_009185 CDS
T06385
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib00521
Streptomycin biosynthesis
pfib00523
Polyketide sugar unit biosynthesis
pfib00541
Biosynthesis of various nucleotide sugars
pfib01100
Metabolic pathways
pfib01110
Biosynthesis of secondary metabolites
pfib01250
Biosynthesis of nucleotide sugars
Module
pfib_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PI93_009185 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PI93_009185 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PI93_009185 (rfbC)
Enzymes [BR:
pfib01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PI93_009185 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QHF12798
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All DBs
Position
2051683..2052231
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AA seq
182 aa
AA seq
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MQVIPTAIPAVRVIEPKVFGDSRGHFFESFNQRNFDDALGETLTFVQDNQSRSARGVLRG
LHYQVKQPQGKLVRVLQGEIYDVAVDIREGSPTFGKWVAEVLSAENKKQLWIPAGFAHGF
VVTSETAEVLYKTTDYWAPQFERCIRWDDPTLAIPWPLDGITPIVSDKDRQGMLFSDYQH
ED
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgattcccaccgccattccggccgttcgtgtgatcgaacccaaggtgttcggc
gactctcgcggccatttcttcgagagcttcaaccagcgcaacttcgacgatgcgctgggc
gagacactgacgttcgtgcaggacaaccagtcgcgttccgcacgcggcgtgctgcgaggg
ctgcactatcaggtcaagcagccgcagggcaaactcgtgcgtgtgctgcagggcgaaatc
tatgacgtcgcggtcgatattcgtgaaggctcgcccacgttcggcaaatgggtcgcggaa
gtcctgagcgccgagaacaagaagcagttgtggattccggcgggcttcgcccacggtttt
gtcgtgacgtcggagacggccgaagtgctgtacaagacgaccgactattgggcgccgcag
ttcgagcgctgcatccgctgggacgatcctacgctggccattccctggccgctcgacggc
atcacgcccatcgtttcggacaaggatcggcaaggcatgctgttttcggactatcagcac
gaagactga
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