Pandoraea fibrosis: PI93_009770
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Entry
PI93_009770 CDS
T06385
Name
(GenBank) ethanolamine utilization protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib03030
DNA replication
pfib03430
Mismatch repair
pfib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PI93_009770
03430 Mismatch repair
PI93_009770
03440 Homologous recombination
PI93_009770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfib03032
]
PI93_009770
03400 DNA repair and recombination proteins [BR:
pfib03400
]
PI93_009770
Enzymes [BR:
pfib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PI93_009770
DNA replication proteins [BR:
pfib03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PI93_009770
DNA repair and recombination proteins [BR:
pfib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PI93_009770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QHF15694
LinkDB
All DBs
Position
complement(2182954..2184594)
Genome browser
AA seq
546 aa
AA seq
DB search
MDPDALARALPAPMVFVDLETTGGNALDDRITEIGVVEVGPHGIEQWSTLLDPAEPIPPF
IQQLTGITNEMVRGQPSFETLAQGLAERLHGKLFVAHNARFDYGFLKNEFRRAGIRFQAD
VLCTVRLSRLLFPTAARHGLDALIARFGLAPLGRHRALADADLLWQFWQKIHTIYAPDLI
EQAVQRVTKRSSQPPQLPDEAIDALPDSPGVYLFYGEGDTLLYVGKSVDIRSRVRSHFSS
DHQVAKDLRISQEIRRVEARRTTGELGALLLESQLVKQLQPVHNRQLRRASNLYSWQLAA
DSDTPQLVSAKTVDFASAEALYGTFSSRASAENALRALADEHRLCCAQLGLEKTAAGRPC
FGYQVKRCDGVCVGDAPLAAHTERVREALTTLQLDTWPYDGPIAIEEHGTGARADDVEYH
VIDRWQYLGSVTSREALNRLVDSMPAVTGFDPDIYRLLGRRLAASRQASEPGLPDAAVAL
PSDEAPAPPRRPLSPLVVLPLSRPAFRLSPVEPPGEVPKKRAVALLRRRQPRPEDPAQIR
LPFDAH
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggacccggatgcgctcgcccgcgccctgcccgcgccgatggtcttcgtcgacctggaa
acgaccggcgggaacgccctcgatgaccgcattacggaaatcggggtagtcgaagtcggc
ccgcacggtatcgaacaatggagcaccctgctcgatcccgccgaacccattccgccgttc
atccagcagttgaccgggatcaccaacgagatggtgcgtggccagccctcgttcgagacg
ctggcccaagggttggcggaacgcctgcacggcaagctgttcgtcgcccacaatgcgcgc
ttcgactacggcttcctcaagaacgaattccggcgcgccggcatccgctttcaggctgac
gtactttgcaccgtgcggctctcgcgcctgctgtttcctacggcagcgcgccacggtctg
gacgcactgattgcgcgtttcggcctcgccccgctaggccgtcaccgtgcgctcgccgac
gccgatctgctctggcagttctggcagaagatccacacgatctacgcgcccgatctgatc
gagcaagccgtgcaacgcgtcaccaaacgctccagccagccaccacagttgccggacgaa
gccatcgacgcgctgcccgacagccccggcgtttacctcttctacggcgagggcgacaca
ctgctctacgtcggcaagagtgtcgatatccggtcacgtgtgcgctcgcatttttccagc
gatcaccaggtcgcgaaggatctgcgtatctcgcaggagatccgccgcgtggaggcccgt
cgaacgacgggtgaactgggggcgttgttgctggagtcgcagttggtcaagcagttgcag
ccggtgcataaccgccaactgcgacgggcgtcgaatctctatagttggcaactcgcagcc
gatagcgacacgccacagctcgtcagtgcgaagaccgtcgacttcgccagcgccgaggcg
ttgtacggcaccttctcctcgcgcgccagcgcggagaatgcacttcgggcactcgcggac
gaacatcgtctgtgttgtgcgcaactcgggctggagaaaaccgctgccggacggccgtgt
ttcggctatcaggtcaaacgatgcgacggtgtgtgcgtaggcgacgcgccactggcagcg
cacaccgagcgggttcgcgaagcactcacgacactccaactcgacacatggccctacgac
ggtccgatcgccattgaggaacacggcaccggcgcgcgtgccgatgacgtggagtaccac
gttatcgaccgctggcaataccttggcagcgtgacgtcgcgcgaggcgttgaaccgcctg
gtcgacagcatgcctgccgtgacgggcttcgatcccgatatctatcgtctgctgggtcgg
cgccttgccgcgtcccgacaggccagcgagccgggcctgcccgacgccgccgtggcacta
ccgtcggatgaagcgccagcgccgccgcgccgccctctctccccgttggtcgtgctgccg
ctcagccgtccggcgtttcgtctgagtccggtcgaacctcccggggaggtccccaagaag
cgcgccgtagcgttgttgcgtcgccgacaaccgcgtcccgaagatccggcgcaaattcgt
ctgccgttcgacgcccattga
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