Pandoraea fibrosis: PI93_009900
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Entry
PI93_009900 CDS
T06385
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PI93_009900 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfib03019
]
PI93_009900 (groL)
03110 Chaperones and folding catalysts [BR:
pfib03110
]
PI93_009900 (groL)
03029 Mitochondrial biogenesis [BR:
pfib03029
]
PI93_009900 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfib04147
]
PI93_009900 (groL)
Enzymes [BR:
pfib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PI93_009900 (groL)
Messenger RNA biogenesis [BR:
pfib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PI93_009900 (groL)
Chaperones and folding catalysts [BR:
pfib03110
]
Heat shock proteins
HSP60 / Chaperonin
PI93_009900 (groL)
Mitochondrial biogenesis [BR:
pfib03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PI93_009900 (groL)
Exosome [BR:
pfib04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PI93_009900 (groL)
Exosomal proteins of other body fluids (saliva and urine)
PI93_009900 (groL)
Exosomal proteins of breast cancer cells
PI93_009900 (groL)
Exosomal proteins of colorectal cancer cells
PI93_009900 (groL)
Exosomal proteins of bladder cancer cells
PI93_009900 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
LCIB_C_CA
Motif
Other DBs
NCBI-ProteinID:
QHF12912
UniProt:
A0A5E4Y3P4
LinkDB
All DBs
Position
2210029..2211675
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVVFGDAARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKFVASGMNPMDLKRGI
DKAVAAAIEELRKISKPCTTNKEIAQVGSISANSDTSIGDYIAKAMDKVGKEGVITVEDG
KSLQDELDVVEGMQFDRGYLSPYFINTPEKQVAILENPFVLLFDKKVSNIRDLLPVLEQV
AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTCAVKAPGFGDRRKAMLEDIAILTGGQV
IAEEIGLTLEKATLNELGQAKRIEIGKENTIIIDGAGEATNIEARVKQIRAQIEEASSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RARVAVADIKGANADQDAGIKIVLRAMEEPLRQIVTNGGEEASVVVANVIAGKGNYGYNA
STGEYGDLVEMGVVDPTKVTRTALQNAASVSGLLLTTDCAVAELPKEDAPMAGGMGDMGG
MGGMGMGM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtcgttttcggcgatgccgctcgtgccaagatggtcgagggtgtc
aacatcctcgccaatgccgtcaaggtgaccctgggcccgaagggccgtaacgtcgtgctc
gagcgcagcttcggcggcccgaccgtgaccaaggacggtgtgtcggtcgccaaggaaatc
gaactcaaggacaagctccagaacatgggcgcgcaaatggtcaaggaagtggcttccaag
accagcgacaacgccggtgacggcaccaccaccgctacggtgctggctcagtcgatcgtg
cgcgaaggcatgaagttcgtggcctcgggcatgaacccgatggatctgaagcgtggtatc
gacaaggccgttgctgccgcgatcgaagaactgcgcaagatcagcaagccctgcacgacc
aacaaggaaatcgcacaagtcggctcgatctcggccaacagcgatacctcgattggtgac
tacatcgccaaggcgatggacaaggtcggcaaggaaggcgtgatcaccgtcgaagacggc
aagtcgctgcaagacgagctggacgtcgtcgaaggtatgcagttcgaccgcggctacctc
tcgccgtacttcatcaacaccccggaaaagcaagtcgcgatcctggagaacccgtttgtc
ctgctattcgacaagaaggtctcgaacatccgtgatctgctgccggtgctcgagcaagtc
gcaaaggctggccgtccgctgctgatcatcgccgaagacgtcgagggcgaagccctggca
acgctggtggtgaacaacatccgtggcatcctgaagacctgcgccgtcaaggctccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgacgggcggccaggtc
atcgccgaagaaatcggcctgacgctggaaaaggccacgctcaacgagctgggtcaagcc
aagcgtatcgaaatcggcaaggaaaacaccatcatcatcgacggtgccggcgaagccacg
aacatcgaagcgcgtgtcaagcagatccgcgcccagatcgaagaagcttcgagcgactac
gaccgtgaaaagctgcaagagcgcgtggccaagctggccggcggtgttgccgtgatcaag
gtcggcgctgcgaccgaagtcgaaatgaaggaaaagaaggcacgcgtggaagatgcactg
cacgctacgcgcgctgccgtggaagaaggcatcgtcccgggcggtggtgttgcactgctg
cgcgctcgcgtggctgtggccgacatcaagggcgccaacgctgaccaggacgccggtatc
aagatcgtcctgcgcgccatggaagagccgctgcgccagatcgtcaccaacggtggcgaa
gaagccagcgtcgttgtggccaacgtgattgccggcaagggcaactacggctacaacgcg
tcgaccggcgagtacggcgacctggtggaaatgggcgttgtggacccgacgaaggtcacc
cgcaccgcactgcaaaacgccgcttcggtgtcgggcctgctgctgacgaccgactgcgcc
gttgccgaactgccgaaggaagatgctccgatggctggcggtatgggcgacatgggcggt
atgggcggcatgggcatgggcatgtaa
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