Pandoraea fibrosis: PI93_010025
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Entry
PI93_010025 CDS
T06385
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib00550
Peptidoglycan biosynthesis
pfib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PI93_010025 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pfib01002
]
PI93_010025 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfib01011
]
PI93_010025 (dacB)
Enzymes [BR:
pfib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PI93_010025 (dacB)
Peptidases and inhibitors [BR:
pfib01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
PI93_010025 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pfib01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
PI93_010025 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
QHF12933
LinkDB
All DBs
Position
complement(2236584..2238176)
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AA seq
530 aa
AA seq
DB search
MRVPRLLSSASHASSSPHSTASRRVMSDAARLCCSALTLAMVMSAPVQAKPAKHAKTPKV
PVAAARATPLPAELSRALAASKVPASHVSVIVAKVDNPLQTRGQIAAPLLAVNPNVPRNP
ASTMKLVTTIAALDTLGPDYRWRTQAFTDGTSDGRTLNGNLYFKGSGDPKLVPEEMEKFV
AELHNAGVANINGDLVLDRSAYSSDIGALGAIDGGDDRPYNVAPDPLLYSFKAVSFSFTG
NPNGTVDVNVLPPLANLQIANEMSSSAAGNCGDWLTRIHPTLNTTPDGAYVAHFSGTYPA
ACEDKGWNVAAPDRDRFFLGGFRALWQASGGQFNGNVRTGVVPPGARLLVTHRGQTLAEV
VHDMNKFSNNVMARQLFLTLGLAADNNRTPASLARSRDVLNRWLDKNDLAMPGLVVENGS
GLSRIERISAAELARLLQHGINSPTGQVLVESMPTVGVDGTMRNRLMNRDVAGNAHIKTG
TLDDVSAVAGYVGTRSGDTYVVVSLVNDPRAGNARAFHDALISWVYENGR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtccctcgcttgctcagcagcgcctcacacgcctcctcttcaccgcactcgacg
gcatcgcgccgcgtcatgagcgacgctgcacgcctgtgctgctcggcgctgacgctcgcg
atggtcatgagtgcccccgtgcaggcgaagcccgccaagcacgcgaagacgccgaaggtg
cccgtcgccgccgcgcgcgccacgccgctgcccgccgagttgtcgcgcgcgcttgcggcc
agcaaggtgcctgcttcgcatgtgagcgtgatcgttgcgaaggtcgacaatccgctgcaa
acgcgcggacaaatcgcggcgccgctgctcgccgtgaatccgaacgtgccgcgcaatccc
gcctcgacgatgaaactcgtcacgacgattgccgcactcgacacgctcggcccggactat
cgctggcgcacgcaggcgttcaccgacggcacatcggatggccgcacgctcaacggcaat
ctgtatttcaagggctcgggcgatcccaagctcgtgcccgaagagatggagaagttcgtc
gccgagttgcataacgcgggcgtggctaacatcaacggcgacctcgtgctcgatcgctcg
gcctacagctcggacattggcgcactcggcgccatcgacggtggcgacgaccggccgtac
aacgtcgcgcccgaccccttgctgtactcgttcaaggccgtgtcgttcagcttcaccggc
aatccgaacggcaccgtcgacgtgaacgtgctgccgccgctggcaaatctgcagatcgcg
aacgagatgtcgtcgtctgcggccggcaactgcggcgactggctcacgcgcattcatccc
acgctgaacacgacacccgacggcgcgtatgtcgcacatttctcgggcacgtatccggcc
gcttgcgaagacaagggatggaacgtggcggcacccgaccgggatcgcttcttcctcggc
ggcttccgcgccttgtggcaagcgtcgggcggccagttcaacgggaatgtgcgcacgggc
gtcgtgccgccgggggcgcgtctgctcgtcacgcatcgcggtcagacgctggccgaagtc
gtgcatgacatgaacaagttcagcaataacgtgatggcgcgccagttgttcctgacgctg
ggcctcgcggccgacaacaatcgcacgcccgccagccttgcccgctcgcgcgatgtcctc
aatcgctggctcgacaagaacgatctcgccatgccgggactcgtcgtcgagaacggctcg
ggcctgtcgcgcatcgagcgcatcagcgccgccgaactggcccgtctgctgcaacacggc
atcaacagcccgaccgggcaggtactggtcgagtcgatgccgacggtcggtgtcgacggc
accatgcgcaaccgcctgatgaaccgtgacgtggccggcaacgcccatatcaagaccggc
acgctcgacgacgtgagcgcggtcgcgggctatgtcggcacgcgctcaggcgacacctat
gtcgtggtctcgctggtgaacgatccgcgcgcgggcaatgcgcgggcgttccacgatgcg
ctcatctcatgggtgtacgagaacggtcgctga
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