Pandoraea fibrosis: PI93_010830
Help
Entry
PI93_010830 CDS
T06385
Name
(GenBank) aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib00260
Glycine, serine and threonine metabolism
pfib00460
Cyanoamino acid metabolism
pfib00630
Glyoxylate and dicarboxylate metabolism
pfib00670
One carbon pool by folate
pfib00680
Methane metabolism
pfib01100
Metabolic pathways
pfib01110
Biosynthesis of secondary metabolites
pfib01120
Microbial metabolism in diverse environments
pfib01200
Carbon metabolism
pfib01230
Biosynthesis of amino acids
pfib01240
Biosynthesis of cofactors
pfib04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PI93_010830
09102 Energy metabolism
00680 Methane metabolism
PI93_010830
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PI93_010830
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PI93_010830
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PI93_010830
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PI93_010830
Enzymes [BR:
pfib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PI93_010830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QHF13071
LinkDB
All DBs
Position
2403285..2404532
Genome browser
AA seq
415 aa
AA seq
DB search
MFDKSKSTVASVDPDVWAAIQKENQRQEDHIELIASENYTSPAVMEAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRVKALFGAEAANVQPNSGSQANQGVYFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNEQEDIDYDAAEKLAQQHKPKMIVAGASAFAL
KIDFERMSQIAKSVGAYFMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEFEKPINSAIFPGIQGGPLMHVIAGKAVAFKEAATPEFKAYQEQVAKNARVMAETL
VERGLRIVSGRTESHVMLVDLRAKNITGKAAEAALGEAHITVNKNAIPNDPEKPFVTSGV
RLGSPAMTTRGFKEDEAKQVAHLIADVLDNPEDAENLARVRAQVAELTKRFPVYG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaaatccaaatctaccgttgcctccgtcgatcccgacgtctgggccgcgatt
cagaaagaaaatcagcgtcaggaagaccacatcgagctgattgcttcggaaaattacacc
agccccgccgtgatggaagcgcagggctcgcaactgaccaacaagtatgcggaagggtat
ccgggcaagcgctattacggtggttgcgagtatgtcgacgtcgtcgaacagttggccatc
gatcgtgtgaaggcgctgttcggtgcggaagccgcgaacgtgcagccgaactcgggctcg
caggctaaccagggcgtgtactttgccatgctcaagccgggcgacacgatcatgggcatg
agcctcgcgcacggcggtcacctcacgcacggttcgccggtcaacatgtcgggcaagtgg
ttcaacgtggtgagctacggtctgaacgagcaggaagacatcgattacgacgctgccgag
aagctcgcgcagcagcacaagccgaagatgatcgtggcgggcgcatcggccttcgccctg
aagatcgacttcgagcgcatgtcgcagatcgccaagtcggtcggcgcgtacttcatggtc
gacatggcgcactacgccggtctgatcgccgcaggggtgtacccgaaccctgtgccgcac
gccgacttcgtgaccacgaccacgcacaagagcctgcgcggcccgcgcggtggcgtgatc
ctgatgaaggcagaattcgaaaagccgatcaattcggccatcttcccgggcattcagggc
ggtccgctcatgcacgtgattgccggcaaggccgttgcgttcaaggaagccgctacgccg
gaattcaaggcttatcaggaacaagtcgcgaagaacgctcgcgtgatggccgaaacgctg
gtcgagcgcggcctgcgtatcgtgtcgggtcgcaccgagtcgcacgtgatgctggtcgac
ctgcgcgcgaagaacatcacgggcaaggctgcggaagctgcgctgggcgaagcccacatc
accgtcaacaagaacgcgattccgaacgatccggaaaagccgttcgtgacgagcggtgtg
cgtctgggctcgccggccatgaccacgcgcggtttcaaggaagacgaagcgaagcaggtc
gcgcacctgatcgccgacgtgctcgacaacccggaagacgctgagaacctggctcgtgtg
cgtgcacaagtggccgagttgaccaagcgtttcccggtttacggctaa
DBGET
integrated database retrieval system
