Pandoraea fibrosis: PI93_011960
Help
Entry
PI93_011960 CDS
T06385
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PI93_011960 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pfib01007
]
PI93_011960 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfib03016
]
PI93_011960 (alaS)
Enzymes [BR:
pfib01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
PI93_011960 (alaS)
Amino acid related enzymes [BR:
pfib01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
PI93_011960 (alaS)
Transfer RNA biogenesis [BR:
pfib03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PI93_011960 (alaS)
Prokaryotic type
PI93_011960 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
Prefoldin_2
Phi29_Phage_SSB
ATG14
HlyD_2
CCDC144C
Bacillus_HBL
ATG17_like
Laminin_II
FtsL_2
CCDC93_CC
ADIP
ZapG-like
Mu-like_Pro
FlxA
Motif
Other DBs
NCBI-ProteinID:
QHF13273
LinkDB
All DBs
Position
2676886..2679510
Genome browser
AA seq
874 aa
AA seq
DB search
MKVADIREKFLNFFESKGHTIVRSSSLVPSNDPTLLFTNSGMVQFKDVFLGLETRPYTRA
TTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWELLTEVYKLP
KDKLWVTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWQMADTGPCGPCSE
IFYDHGADVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDEQGNMTPLPKPCVDTGMGLERI
AAVLQHVHSNYEIDLFQHLIKAAGRETGVTDLTANSLKVIADHIRACSFLIVDGVIPGNE
GRGYVLRRIIRRAIRHGYKLGCKTPFFYKLVPDLVAEMGVAYPELAQAQQRVTDVLKQEE
ERFGETIENGMEILEGALADLAKRGVTTLDGELAFKLHDTYGFPLDLTADVCRERSITVD
EAAFDAAMARQREQARAAGKFKMATALEYTGDKTRFQGYDKLVLEGAKVTALYLDGTSVG
KLSAGQQGIVVLDTTPFYAESGGQVGDQGLIVAGGARFGVSDTQKIQADVFGHYGTLESG
ELKVGEAVTAQVDAVRRARTVRNHSATHLMHKALREVLGAHVQQKGSLVDADKTRFDFAH
NAAMTADEIRRVEDIVNAEVLANAPTQAALMSFDDAVKGGAMALFGEKYGDEVRVLDIGS
SRELCGGTHVTRTGDIGLFKIVMEGGVAAGIRRVEAITGDNSVRFVQKLDDQVNEAAAAL
KTQPAELTPRIAQVQEQVKSLEKELAALKSKLASNQGDELVEKAVDVNGLKVLAAQLEGA
DVKTLRETMDKLKDKLKSAAIVLAAVDGGKVSLIAGVTADATGKVKAGELVNFVAQQVGG
KGGGRPDMAQAGGTDPSQLPQALAGVQGWVAGKF
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgcagacattcgggaaaaattcctcaacttcttcgagtcgaaggggcacacc
atcgtgcgctcgtcgagcctcgtgccgtccaatgaccccacgctgctgttcacgaactcc
ggcatggtgcagttcaaggacgttttcctcggtctcgagacgcgtccgtacacgcgcgcg
accacggcccagcgcagcgtgcgcgcgggcggcaagcacaacgatctggagaacgtcggc
tacacggcgcgtcaccacacgttcttcgaaatgctgggtaacttctcgttcggcgactac
ttcaagcgcgaagcgatccaatatgcgtgggaactgctgacggaagtctacaaactgccg
aaggacaagctctgggtcaccgtctatcaggaagacgacgaggcctacgacatctgggcg
aaggaagttggcgtgccgaccgagcggatcatccgcatcggcgataacaagggagcacgc
tacgcctcggataacttctggcagatggccgacaccggcccgtgcggcccgtgctcggag
attttctacgaccatggcgccgatgtctggggtggccccccgggatcgccggaagaagac
ggcgaccgctatatcgagatctggaatctcgtgttcatgcagttcaaccgcgacgagcag
ggcaacatgacaccgctgcccaagccgtgcgtcgataccggcatgggactggagcgtatc
gcggcggtgctgcagcatgtgcacagcaactacgaaatcgatctgttccagcacctgatc
aaggctgctggccgtgaaaccggtgtgaccgatctcacggcgaactcgctcaaggtgatt
gccgatcacattcgcgcgtgctcgttcctgatcgtcgacggtgtgatcccgggcaatgaa
ggccgtggctacgtgctgcgccgtatcatccgccgtgccatccgtcacggttacaagctc
ggttgcaagactccgttcttctacaagctggtgccggatctggtcgccgaaatgggcgtc
gcctatccggaactcgcacaggcgcagcaacgcgtgaccgatgtgctcaagcaggaagaa
gagcgtttcggtgaaaccatcgagaacggcatggagattctcgaaggcgcactggccgat
ctggccaagcgcggcgtgacgacactcgacggcgaactcgccttcaagctgcacgacacg
tatggcttcccgctcgatctgacggccgacgtttgccgcgagcgcagcatcacggtcgac
gaagcggcgttcgatgccgccatggcgcgtcagcgcgaacaagcccgcgctgcgggcaag
ttcaagatggcaacggcactcgaatacaccggcgacaagacccgcttccagggctacgac
aagctcgtgctcgaaggtgcgaaggtcacggcgctctacctcgacggcaccagcgtgggc
aagctcagcgccggtcagcaaggcatcgtcgtgctcgacaccacgccgttctacgcagag
tcgggcggtcaggtgggcgatcaggggctgatcgttgctggcggcgcacgtttcggtgtg
tccgacacgcagaagattcaggccgacgtgttcggccactacggcacgctggagtcgggc
gagctgaaggtgggcgaggcggtcacggcgcaggtcgatgccgtgcgtcgcgcacgcacc
gttcgcaaccactccgccacgcacttgatgcacaaggcgctgcgcgaagtgctgggcgct
cacgtgcaacagaagggctcgctggtcgacgccgacaagacgcgcttcgacttcgcacac
aacgcggcgatgaccgccgatgaaatccgtcgtgtggaagacatcgtcaacgcggaagtg
ctggcgaatgcaccgacgcaagcggcgctgatgtcgttcgacgatgccgtcaaggggggc
gcgatggccctgttcggcgaaaagtacggcgacgaagtgcgcgtactcgatatcggctcg
tcgcgcgaactgtgcggtggtacgcacgtgacgcgcaccggcgatatcggtctgttcaag
atcgtgatggaaggcggcgtcgctgccggtatccgccgcgtggaagccatcaccggcgac
aactcggtgcgtttcgtgcagaagctcgacgatcaggtcaacgaggctgccgctgcgctc
aagactcagccggccgagctgacgccgcgtatcgcgcaggtgcaggagcaggtcaagtcg
ctcgagaaggaactggcggcgctcaagtcgaaactcgcgtcgaatcaaggtgacgaactg
gtcgagaaggctgtcgatgtgaacggtctgaaggtgttggccgcacagctcgaaggcgcc
gacgtcaagaccctgcgcgaaacgatggacaagctcaaggacaagctcaagagcgcagcg
atcgtgctcgccgcagtcgacggcggcaaggtcagcctgatcgctggggtgacggccgac
gcgaccggcaaggtcaaggccggcgaattggtcaacttcgtcgcgcagcaggtcggcggc
aaggggggcggtcgtccggacatggcgcaggcgggcggtaccgatccgtcgcaactgccg
caggcgctggccggcgtgcagggttgggttgccggcaagttctga
DBGET
integrated database retrieval system
