Pandoraea fibrosis: PI93_012160
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Entry
PI93_012160 CDS
T06385
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
pfib
Pandoraea fibrosis
Pathway
pfib02020
Two-component system
pfib02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PI93_012160
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PI93_012160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pfib02035
]
PI93_012160
Bacterial motility proteins [BR:
pfib02035
]
Flagellar system
Chemotaxis proteins
MCPs
PI93_012160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
4HB_MCP_1
HAMP
TarH
Sigma70_ner
DUF6278
Anticodon_3
mit_SMPDase
KASH_CCD
Motif
Other DBs
NCBI-ProteinID:
QHF13306
LinkDB
All DBs
Position
2728126..2729721
Genome browser
AA seq
531 aa
AA seq
DB search
MKFLGSLKIGTRLTIGFAITLVLLCIVGGMAVFQASRIYGGTRDLADNWLPSVQTLGTAQ
VAANAARRATLATLLTTVDSTRADETKKRQASIDLMNKTLDSYNSMVASDEDRRAYDAVR
AAWASYLEVDNRVADLEKGDDAAKEQARTLVMTDAVKRFAVLSDRLTEHVAVNRAGAQAA
SEAAANNYHTAFIAAVVLILLALGVNIVIALVITRSITVPIGRCVDIAQTVARGDLSSRI
DVHGKDELAQLLGSLRDMNTKLAQVVGQVRHTSESIATGSAQIAAGNTDLSSRTEQQAAS
LEETAASMEELTTTVKQNADNAEQGNVLATNASHIAQRGGEVVRQVVETMREISEGSARV
SDITSVIEVIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSANAAKEIKELI
DASTRQVSDGAKLVAEAGSTMDEVVHAVKRVTDLMAEIAAASTEQRTGIEQVNQAVMQMD
TVTQQNAALVEEASAAAQSMAAQSGGLRELVSIFTLEGAANQGHRAQRLSA
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcttgggtagtctcaaaatcggcacacggttgaccatcgggtttgccattacg
ttggttctgctgtgcatcgtgggtggcatggcggtgttccaggcgtcgcgcatttatggc
ggtacccgcgatctggccgacaactggctgcccagcgtgcagacgctcggtaccgcacag
gtcgcggccaacgcagcgcgccgcgccacgctcgccacgctgctgacgacggtcgacagc
actcgggcggacgaaacgaaaaagcgccaggcgtccatcgatctgatgaacaagacgctc
gacagctacaacagcatggtggcctcggacgaagaccgtcgcgcgtatgacgccgtgcgc
gccgcctgggcaagctatctcgaggtcgataaccgtgtggccgatctggaaaagggcgat
gacgcagccaaggagcaggcgcgcacgcttgtgatgaccgacgccgtcaagcggttcgcg
gtgctcagcgacaggctcaccgaacacgtggcggtgaaccgtgccggcgcacaggcggcg
agcgaggcggccgccaacaactatcacaccgcttttatcgctgccgttgtgctgatcctg
ctggcactgggcgtgaatatcgtgattgcgctggtcatcacgcgctcgattacggtgccg
atcggtcgctgcgtcgacatcgcacagacggtggcccggggcgatctcagttcgcgtatc
gacgtgcacggcaaggacgaactcgcgcaattgctggggtcgctgcgcgatatgaacacg
aagctggcgcaggtcgtggggcaagtgcgtcataccagcgagagcattgcgacggggtcg
gcgcagatcgccgccggcaacaccgatctgtcgtcgcgcaccgaacagcaggcggcgtcg
ctggaggaaacggcggcgagcatggaggaactgacgaccaccgtcaaacagaacgccgac
aacgcggagcagggtaatgtgctggcaacgaacgcgtcgcatatcgcccagcgcggcggc
gaggtggtgcgtcaggtggtcgagacgatgcgcgaaatttccgaagggtcggctcgcgtc
tcggacatcacgagcgtgatcgaagtgattgcgttccagaccaacatcctcgcgctcaat
gccgcggtggaagcggcgcgcgccggagagcagggccgcggcttcgcggtcgtcgccggg
gaagtgcgcacgctcgcgcagcgcagcgccaatgcggcgaaggaaatcaaggagctgatc
gatgcgtcgacgcgtcaggtcagcgacggtgcaaaactcgtcgccgaggcgggtagcacg
atggacgaggtggtgcacgccgtcaaacgcgtgaccgatctgatggcggagattgccgcc
gcgtcgaccgaacagcgcacgggcatcgagcaggtcaatcaggcggtgatgcagatggat
accgtgacgcagcagaacgccgcgttggtcgaagaagcctcggccgccgcacaatcgatg
gcagcgcaatcgggcggtctgcgtgaactcgtgtcgatcttcacgctggagggggcggca
aatcaggggcatcgcgcgcagcgactgtcggcctga
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