Pandoraea fibrosis: PI93_012265
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Entry
PI93_012265 CDS
T06385
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
pfib
Pandoraea fibrosis
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfib03000
]
PI93_012265 (prpR)
Transcription factors [BR:
pfib03000
]
Prokaryotic type
Helix-turn-helix
Other families
PI93_012265 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
PAS_4
PAS
AAA_5
PAS_8
AAA
Mg_chelatase
HTH_23
AAA_16
PAS_9
AAA_7
HTH_7
DUF6262
AAA_2
AAA_22
HTH_30
TIP49
NACHT
AAA_3
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QHF15743
LinkDB
All DBs
Position
complement(2754800..2756809)
Genome browser
AA seq
669 aa
AA seq
DB search
MRKPVIWAVGISKLGELYRDIVPDYAAQADVQIIDKGYDAVIEALERLPPGSVDGIVAAG
SNGAFLRERVALPVVLVKVTGFDVMHALARARRALPSPAPASRIALVSYARPAQEFERFK
SAFHLDIAQHAYFDAHDAEDLVHRLRDEGMQVIVGPGLVTELAERAGLTGVFLYSQDSVR
AAFDTALEVARFGRIEAQRRERLDTVLRHLHEGVAAVDLNGRIEAINASMASMLGVTVAD
ALGRPLDAIAPALDIARTLESASAELEAIVSMAGKTWVINRIPLLDQGTLTGALLTCQDS
QSFARVDRSLRSRHRPRHLVARYRLDDLIGDSAAMMQVRTLARRYAQTDSTVLVHGESGT
GKELLAQGIHNASRRRDYPFVAINCAAFPETLLESELFGYEDGAFSGARRGGKAGLFETA
HNGTLFLDEIGEMPMPLQTRLLRVLQEREVLRLGATEPVPCDVRVIAATHRDLRQQVAAG
LFREDLYYRLNILRMVLPPLRERMEDLPRLTPLFLERALARAGARMSVDALQASLLPLLA
TYRWPGNVRELENLLERIAVVCADVVDAREIGHARLIEIAPELGAAPSDVSKANSGRKID
SHASPGMDMTGERADPVPPMSGRARRAAEELERIHATLAACGGDRSAACEALGISRSTLW
RKLRDTRDD
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atacgcaagcccgttatctgggccgtgggcatcagcaagctcggcgagttgtaccgagat
atcgtgccggactacgccgcgcaagccgacgtgcagatcatcgacaaggggtatgacgcg
gtcatcgaggcattggaacgcttacccccgggtagcgtcgacggcatcgtcgctgcggga
tcgaatggtgcctttctgcgcgagcgcgtcgcactgccggtggtgctcgtgaaagtcacc
ggattcgacgtgatgcatgcgctggcgcgtgcgcgtcgtgcgctgccatcccccgcgccc
gcatcacggatcgcgctggtgtcttatgcgcgcccagcccaggagttcgagcgcttcaag
agcgcctttcacctcgatattgcccaacacgcgtatttcgatgcgcacgatgcggaagac
ctcgtacaccggttgcgcgacgaaggcatgcaggtcatcgtcggccccggcctcgtgacc
gagctggccgagcgggcaggactgacaggcgtgtttctttactcgcaggattcggtgcgc
gcagcgttcgatactgcgctcgaagtggcgcgtttcggccgcatcgaggcgcaacgccgc
gagcggctcgacaccgtactgcgacacctgcacgaaggcgtggcggcagtcgatctgaac
ggccgcatcgaagccatcaacgcgtcgatggccagcatgcttggcgtgacggttgccgac
gcgctgggtcgcccgctggacgcgattgcccccgcgctggatattgcccgcacgctggaa
agcgcgagcgccgagcttgaagccatcgtctcgatggcgggcaagacatgggtcatcaac
cgaattccactgctcgatcagggcacgctcacaggtgcattgctcacctgccaggactcg
caatcgttcgcgcgcgtggatcgttcgcttcgctcgcgccatcgcccgcgtcatctcgtg
gcacgctaccggctcgacgacctgatcggcgattcggcggcaatgatgcaagtgcgcacg
ctggcacgccgttacgcacaaaccgattcgaccgtgctcgttcacggcgagagcggtacc
ggcaaggaactgctcgcacaaggcattcacaacgccagccgccggcgcgactaccccttc
gtcgccatcaattgcgccgcgtttccggagacgctgctcgagagcgaactgttcggctat
gaagacggcgccttctccggcgcccggcgcggcggcaaggcgggactgttcgagaccgct
cacaacggcaccctcttcctcgacgagatcggcgagatgccgatgccgttgcaaacacgg
ctgttgcgggtcttgcaggaacgcgaagtcctgcgcctgggggcgaccgagccagtcccc
tgcgatgtgcgcgtgattgccgccacgcaccgcgatcttcgtcagcaagtcgccgctggc
ctgttccgcgaagacctgtactaccggctcaacattttgcgaatggtcttgccgccgctg
cgcgaacgcatggaagacctgccacgcctcactcccctctttctcgaacgcgccctcgcc
cgcgccggggcgcggatgagcgtcgatgcgctgcaggcatcgctgctgccgctgctcgcc
acctatcgctggccggggaacgtgcgggaactggagaatttgctggagcgcattgcggtc
gtgtgcgcagacgtcgtcgacgcccgcgaaatcggtcatgcgcgattgatcgagatcgcc
ccggagctcggcgcagcgccatccgatgtttcaaaagcgaacagcggccggaaaatcgac
tcacatgcgtcgcccggaatggacatgaccggggagcgcgcggacccggtgccgcccatg
tcgggccgcgctcggcgcgccgccgaggaactcgagcgcattcacgccacgctggcggcc
tgcgggggggatcgcagcgccgcctgcgaggcgctcggcatcagtcgctcgaccctctgg
cgcaaacttcgcgacacgcgggacgactga
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