KEGG   Pandoraea fibrosis: PI93_012590
Entry
PI93_012590       CDS       T06385                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
pfib  Pandoraea fibrosis
Pathway
pfib00061  Fatty acid biosynthesis
pfib00071  Fatty acid degradation
pfib01100  Metabolic pathways
pfib01212  Fatty acid metabolism
pfib02024  Quorum sensing
pfib04146  Peroxisome
Module
pfib_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:pfib00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    PI93_012590
   00071 Fatty acid degradation
    PI93_012590
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    PI93_012590
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PI93_012590
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:pfib01004]
    PI93_012590
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pfib04147]
    PI93_012590
Enzymes [BR:pfib01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     PI93_012590
Lipid biosynthesis proteins [BR:pfib01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   PI93_012590
Exosome [BR:pfib04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   PI93_012590
  Exosomal proteins of breast cancer cells
   PI93_012590
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: QHF13383
LinkDB
Position
2827053..2829026
AA seq 657 aa
MQERTTFPRLLLAHAATRGERTAYREKDLGIWQSWSWQEAAQEVRMLACALACAGFKRGD
NLAIVGNNRVRLYWAMTAAQSLGGVAVPLYQDAVAAEMIHVLEDAEIDFAIVEDQEQVDK
LLELRERVPRLSNIIYEDPRGLRNYDAAGLLSYADAVERGRDFNARHPRYFDEAVASVDP
EDTATILYTSGTTGKPKGVCHSHAGLIGAAFHGSAFDKLAPGDEVLSYLPMAWVGDHLFS
YAQALVAGFTVNCPESPDTISTDMREIGPTYYFAPPRVYENVLTQVMIRMEDANRLKRKM
FAHFMNVANRCGAAVLDRRPVPLLDRLQYAVGNLCVYGPLRNTLGMSRIRTAYTAGEAIG
PDLFHFYRAIGVNLKQFYGQTETCAYVCLQPDRQVRFDSVGPVAPGMEIKIADSGEVLVR
GVGLLKEYYKRPDATREALDETGYFRTGDAGIIDADGHLRIIDRAKDVGKLASGSLFAPK
YIENKLKFFAYIKEAVAFGDGRDGVCAFINIDMDAVGNWAERQSLAYAGYVDLACHPQVA
ELILGCVDAVNADLAKESAFSAAQIQRFVILHKELDPDDDELTRTRKVRRAFIAEKYGVL
VDAFYSGKSSQFIETRVKFEDGREGSVSATLTIHPARVVGARAPVDDPAPEKLRCAA
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgcaggagcggaccactttcccgcgcttattgctggcccatgcggcaacgcgtggcgag
cgcacggcgtatcgggaaaaagatctggggatctggcaaagctggagctggcaggaggcc
gcgcaggaagtcaggatgctggcctgtgcgctggcatgcgccgggttcaagcggggcgat
aacctcgccatcgtcggcaacaatcgcgtgcgcctgtactgggcgatgaccgcagcgcaa
tcgctgggtggcgtggccgtgccgttgtatcaggacgccgtcgcggcggaaatgattcat
gtgctggaagacgccgaaatcgatttcgccatcgtcgaagaccaggagcaggtcgacaag
ctgctcgaattgcgcgagcgtgtgccgcgtctgtcgaacatcatctatgaagacccgcga
gggctgcgcaattacgacgccgccggcttgctgtcgtatgccgatgccgtggagcggggc
cgcgacttcaacgccaggcatccgcgctacttcgacgaggcggtggccagcgtcgatccc
gaggacacagcgacgatcctttacacgtccggcacgacaggcaagcccaagggcgtgtgt
cattcgcacgccggtctgatcggcgcggcgtttcatggcagcgcattcgacaagctcgcg
cccggcgacgaagtgttgtcgtacctgccgatggcatgggttggcgatcatctgttctct
tacgcgcaggcattggtggcgggcttcaccgtcaattgccccgagtcgcccgacacgatc
tcgacggacatgcgcgagattggaccgacctattacttcgcgccgccacgcgtttatgaa
aacgtgttgacgcaagtgatgatccgcatggaagacgcgaatcgcctcaagcgaaagatg
tttgcgcatttcatgaacgtggcgaatcgttgcggcgctgcggtgctcgaccgccgtccg
gtgccgctactcgaccggctgcaatatgccgtgggcaatctctgtgtctacgggccattg
cgcaacacgctcggcatgagtcggatccgcacggcgtataccgccggagaagcgatcggc
ccggatctgttccatttttatcgtgctatcggcgtcaacctgaagcagttctacgggcag
accgagacgtgcgcctatgtctgcctgcaaccggaccgtcaggtgcgattcgacagcgtg
gggccggtcgcgccgggcatggaaatcaagatcgccgacagtggggaagtgctggtgcgc
ggcgtgggattgctcaaggagtattacaagcggcccgacgctacgcgcgaagcgctcgac
gagaccggctatttccgcacgggcgatgccggcatcatcgacgcagacggtcatctacgc
atcatcgatcgcgcgaaggacgtgggcaagctcgccagtggctcgctgttcgcaccgaaa
tacatcgagaacaagctcaagttcttcgcgtacatcaaggaagcggtcgcgttcggcgat
gggcgcgacggtgtgtgtgcgttcatcaacatcgacatggacgccgtgggcaattgggcg
gagcggcaaagcctggcgtatgccgggtacgtcgatctggcctgtcatccacaggtcgcc
gaactgattctgggctgcgtggatgcggtgaatgcggatcttgccaaggagtcggctttc
tcggcggcacagattcagcgcttcgtgattctgcacaaggagctggacccggacgacgac
gaactcactcgcacgcgcaaggtgcgtcgcgcctttatcgcggagaagtacggcgtgctg
gtcgacgcgttctattcgggcaagtcgtcgcagttcatcgagactcgcgtgaagttcgag
gatgggcgcgagggcagcgtgagcgccacgctcacgatccatcccgctcgcgtggtgggt
gctcgggcccctgtcgacgaccctgcgcctgaaaaattgcgctgcgccgcctga

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