Pandoraea fibrosis: PI93_012710
Help
Entry
PI93_012710 CDS
T06385
Name
(GenBank) filamentous hemagglutinin N-terminal domain-containing protein
Organism
pfib
Pandoraea fibrosis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
ESPR
Motif
Other DBs
NCBI-ProteinID:
QHF13406
LinkDB
All DBs
Position
2859721..2866389
Genome browser
AA seq
2222 aa
AA seq
DB search
MNKNRFRKVFSERLGMLVAVGEDAKGQGKGLGTGTGGGAVVDLHVVSGIKSVVLAIVLAL
AETTAFAQSLPTGGQYTAGSGTISTNGGTMTVDQNTQRGVINWNTFNVGAGNTVQFNQPN
AQSKTLNIVSGGMPSNIQGSLLANGQIFIQNSSGILFGKGAVVNVGSLLATTKAIDPNAF
MNGDVLTLSSTGQNGKVQNDGTINASGFVTLMGDQVRNTGSITVPGGQVVLAAGDSATVA
LANSQGLSLTLTNATASALVENSGQIVADNGSVLLTARGSDTLLKTVINMSGVVQAGSGA
IVADAGSTGDVIVTGKLDASNMSAGGVGGDVVLSGNRIGLSDTARIDVSGDGDAGYAVIG
GDTLHKVPGTKAAGLIGNVTFADAVQIDRGAQIMARSVHGNGGFLETSGRYLNMQGQVDA
SAPNGKNGSWLIDPTDVTISTDDDTNYTGPLGNGTFNWNTGSETAVVNNGSLVDALNSGT
DVTITTASDGPATGNISVKADIVTHSAQSANLTLLANNSLYIGDQTDVRIAADGDGALNV
NMVATDGTAYVGSTGHNVTFDTKGNVSITGGSETSGAVGLQLAGNVNVVSGNVALTGSSN
SNVGVKGLENSAINVSDGHLDINGSSGLSTGVDISNLTIDGTATAGLTGAGRTGVAADNI
VVSNSGALDISGIGTPPNEGYHGTGVKVTNLTIGGSGSVNITGEGRVLTKDLDSHGVIAD
NISVSEHGSLNIAGESLGRNDSSAVNIANLSVFGDGRVNVTGNSTYNGSFSPFGVMANNI
SVSENGSLNVTGVAQTGQAVHVTNVSVSGHGSLDLVGTSNFSNTNQNDAAVFVNNLSVAD
EASANLTGSGFIGINVSVVRVSDHASVNFTGNGGKFTGVSIGGLTVSGGTVDFNGTGRGT
GSGVVATNVNASNGALISFNGTTSGTGNAVCITTAIVSSDASIDAIGTATGSGAGINVTN
VRASTGSSLNFTGTAASGGGIVATTVNVSGGSANFSGTSGGAGAGISASHIVASGGSIDL
TGNGTGSGAGVSATDVTVSGNGSMHFNGASAASTGVDANQVIASSNGAIDLIGHGATAGV
SVTDGNVSGGSVKLNGTSEAATGVNIANLTVSGDAKVEGVGTGATGVIADQINVLDNGVL
DIAGNGTGAGAGVLAANVTASGSGAIHLNGTSAASAGVDVNHVEAAGSSVIDLVGNGATA
GISATDVNATGGSVAMNGTSDTATGVNIADLTISGDAKVGVVGTGTTGVIADRIDVADNG
ELGISGNGISTDTAHGVMLANLTIEGSGSANITGISNGSDKDNMSFGVDANNISVSGLGS
LNVVGNTAGRERSAGVNVTNLDVSGDASVDVTGYSSYGGSYSAYGIRATDVNVSGGGTFN
ATGTAVAGEGVGATNVHVFESGSIDIVGSVASANPNQTAAAVALSGFEVSGSGSANVTGA
GFVGIKANKITVSDDGKINLYGTATNTSGIGVVATNVTASGGLIDVDGASAGSGAGVSAS
NVTAAGGVIHLAGVSTGSGAGVSATNVSASAGEIDILGTNTGSAAGVSATNVAASGTGSI
IVNGTSTTTAGIEAQHVVASESGSIDLTGSGVTSGIAASEIDVSGGVVKMNGTSQTGDGV
VLLASVKVSGDGALTIAGNSVSGSGVSLPADVDISGGRMTLIGSSESGVGLSEAGGSVNV
SGNGVADLSGTSNDSSGVQIGSDVNVSGAGALSVSGISTNGTGTLLDGDINVNDSATVDV
SGTSTSGVGTQADGAIHVSGDGRTTFRGTSTNGVGTQVGGAIDVSGNGRVNVSGTSASDA
GVLLDPTGSVTASGEGSATISGNSMDGVGAQINGTVNARENGSIIILGRSENSTGALIDV
NGLASASDNGSIDISGASTNGSGAQVDGLVDIKDYASGNVSGMSTNAQGMAVGADGVIKT
SDNGSSHITGSSLNGSGVSIDGLVDVSGSGLGNISGNSTNGVSMVLGNHALIAASDNSVL
NVSAPGNANGSIAVNQSGDAKVYIDYNIPDNNGNTTPVDPTDPTGPTNPTNPTDPTTNTP
GDGGVTNPSTGDSGGGSNSVGGIVGGVLGAVGLGTLILNTHGVMYLEQPVPLAVDSGDVS
YWGEVSLEHLQIDLNGDQAEIALHTPDGPVKRQLKLLDGGDGVKHYTSVDEQTGIKSDLT
FNPKTSEYFYTEAGTRASKAYKVSAHGWLKERATLGAPSPLANASMPVDQTAHAAQVSSI
AK
NT seq
6669 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaaccgattccgtaaggtgtttagtgagcgtctgggcatgctggtagccgta
ggtgaggacgctaagggccaagggaagggactgggtactggcaccggaggtggtgctgtc
gttgatttacatgtcgtctcagggatcaagagcgtggtgctggcgattgtgcttgcgttg
gcggagacgacagcgttcgcgcagtcgctgcccacaggcggtcaatacaccgcaggctcg
ggcacgatcagcacgaatggcggcaccatgaccgtcgatcagaacacccagcgcggggtg
attaactggaacacgtttaacgtgggtgcgggtaatacggttcagttcaatcaaccgaac
gctcagtcgaagacgctcaatatcgtcagcggtggcatgccgtccaatattcagggcagt
ctgctcgccaacggtcagatcttcatccagaactccagcggcattctctttggtaagggc
gcggtggttaacgtcggttcgctgttggcgacgaccaaggcgatcgatccgaatgcgttc
atgaatggggacgtgctgaccctatcgtcgacgggccagaacggaaaagtacagaatgac
ggcacgatcaatgcgtcgggttttgtgacgctgatgggcgatcaggtgcgtaataccggc
tcgatcacggtgccgggcgggcaggtggtgctcgccgcgggcgatagcgccacagtggcg
ctggccaacagccagggcctgagcctgacgctgaccaacgcgacagccagtgccttggtg
gagaacagcggtcagatcgtggcggataacggttcggtcctgctgaccgcgcgcggtagc
gacacgttgctcaagacggtgatcaatatgtcgggcgtggtgcaagccggctcaggagcg
attgtggctgacgcaggcagcacaggcgacgtgatcgtcacgggcaagctcgatgcgtcg
aacatgagcgcgggtggtgtgggcggcgacgtggtgctctcaggcaaccgcatcggccta
tcggacacagcgcgcatcgatgtgagcggcgatggcgacgcaggctatgcggtcattggc
ggtgacacgctgcacaaggtgccgggcaccaaggcagcaggattgatcggcaacgtgacg
ttcgccgacgcagtacagatcgaccgtggcgcccagatcatggcgcgttcggtgcatggc
aacggcggctttctggagacgtcgggccgttacctgaacatgcaagggcaggtcgatgcg
tcggcaccgaacggcaagaatggctcgtggctgatcgatccgacggatgtgacgattagc
acggatgacgacacaaactacaccggcccgttgggcaacggcacgttcaattggaatacc
gggtccgagacggcggtggtgaacaacggctcgctggtcgacgcgctgaacagcggcacg
gacgtgacgatcaccacggcgagtgatggccctgccacgggcaatatctcggtgaaagca
gacatcgtcacgcatagcgcccagagcgcaaacctgacgctgcttgccaacaacagtctg
tacatcggggatcagacggatgtgcgaattgcggcggacggcgacggtgcgctcaacgtc
aatatggtggcaactgatggcacggcgtatgtcggaagcaccgggcataacgtgaccttt
gacacgaagggcaacgtcagtatcacgggggggagtgagacctctggggcggtagggttg
caactggccggcaacgtgaacgttgtctccggcaacgtggcgcttacgggatcatccaat
agcaacgttggcgtcaaagggcttgagaactccgcgataaatgtgtccgacggtcatctc
gatatcaatggttcgtcgggtttgtcgactggcgtcgatatttcaaacttgacgattgac
ggaaccgccacggctggactgacaggcgcgggaagaacgggcgtagccgcagacaatatc
gttgtgtcgaatagcggcgcgcttgacatttccggtatcggaaccccgccaaatgagggc
taccacggaacgggtgtcaaagtcacgaacctcacgatcggagggagtggctctgtcaat
atcactggtgaaggccgagtccttactaaagacctggatagccacggtgtcattgcggac
aatatcagtgtttccgagcacggatcgctaaatatcgccggcgagtctcttgggagaaat
gattcttccgcggtgaacatcgcaaacctcagtgttttcggcgacggcagggtcaacgtg
acggggaatagtacctataacggttcattttcccccttcggcgttatggcgaataacatt
agtgtgtcggaaaatggctcgctcaatgtcaccggtgtcgcgcaaacagggcaagcagtt
cacgtcaccaatgtctcagtctcaggccacggatcgctcgatcttgttggcacctcgaac
ttcagtaataccaatcaaaacgacgcggcagtcttcgtcaacaatctgagcgttgctgac
gaggcttccgccaatctcacggggtcgggttttatcggaattaatgtgagtgtcgttcgc
gtctccgaccatgcctcggtcaatttcactggcaatgggggtaagttcactggcgtcagc
ataggagggcttaccgtttctggcgggaccgtagatttcaacgggactggccgcggcacg
ggctcgggcgttgttgccactaatgtcaatgcgtccaacggcgcgttaatttctttcaac
ggaacgacctccggaacgggtaacgccgtttgtataaccactgctatcgtctccagtgat
gcctcaattgacgccatcggaacagcgactggatcaggcgcaggaatcaatgtaaccaat
gtgagggcctctaccggcagttcactcaatttcacagggactgccgcttcggggggcggc
attgtcgcaacgaccgtaaacgtttccggtggttcggctaatttcagcgggaccagtggg
ggagcgggtgcaggtatttccgccagccacatcgttgcttccggcggttcaatcgatctc
actggaaatggcactggatccggggcaggcgtcagcgccaccgacgtcaccgtttccggc
aatggatccatgcatttcaatggcgccagtgcggcgagcacgggtgttgacgccaatcag
gtcatcgcttccagtaacggcgcaatcgatctcattggacatggcgcgacagcgggcgtc
tcggtcactgacgggaatgtctccggtggttcagtaaaactgaacggcacatcagaagcc
gcgacaggtgtcaatattgccaatctcacggtaagtggcgacgctaaggtagagggtgtt
ggtaccggcgcgacgggggtgattgccgaccagatcaatgtcctggacaacggggtgctt
gatattgcgggcaatggcaccggagcgggagcgggcgtcctcgccgctaatgtcaccgct
tccggcagcggagccattcatctcaatggcacaagcgcggcgagtgcgggtgttgacgtc
aatcacgtcgaggctgccggaagcagcgtcatcgatctcgttgggaatggcgccacagcg
ggaatctcggcaacggacgtgaatgcgaccggtggctcggtggcgatgaacggcacatcg
gacactgcaacgggcgtcaatattgccgatctgacaatcagtggcgacgctaaagtgggg
gtggtgggcactggcacgacgggagtgattgcggatcgcatcgatgttgcagacaacggt
gagctaggaatttccggcaatggaatctcgacggatacggcgcacggtgtgatgctggcg
aatcttacgattgaaggcagcggctccgccaatatcactggaatctcgaacggtagcgac
aaggacaatatgtctttcggcgttgacgcaaataacattagtgtctccggtctggggtcc
ctcaatgttgttggcaataccgcagggcgagagagatctgcaggggttaacgtaaccaac
ctcgatgtctcgggcgacgcttcagtcgacgtgaccggttattcgtcctatggtgggtcg
tattccgcctatggcatcagagcgaccgacgtcaacgtttccggaggcggtacgttcaat
gccaccggtaccgccgtggcaggagagggcgttggggcgacgaatgtccatgtgttcgaa
agcggctcaatcgatattgtgggtagcgttgcttccgctaatcccaatcagacagccgcc
gccgttgcgttaagcggctttgaagtctcgggaagcggctctgcgaatgtcacgggggca
gggtttgtcggcatcaaggcaaacaagatcaccgtttccgacgatgggaaaatcaatctc
tacggtaccgccacgaatacttcgggcatcggcgttgttgctacgaacgtcactgcatcc
ggcggcttgatcgatgtggacggtgcgagcgctggctcaggcgcaggcgtgagcgcatcc
aacgttaccgcggctggcggcgtcattcatctcgccggcgtcagcactggatcgggggcc
ggcgttagcgcaaccaatgtcagcgcgtccgcaggcgagatcgatatcctgggaaccaac
accggatcggcggctggcgtcagcgccaccaacgtcgccgcttctggcacgggctctatc
attgtcaatggcacaagcactacgactgctggcatcgaggcgcagcatgtcgttgcttcc
gagagcggttccattgatctgacgggaagtggcgtcacgtcgggtattgctgcatcggag
atcgatgtttccggcggcgtggtgaagatgaacggcacgtcacagaccggagacggcgtc
gttctgttggccagtgtgaaggtatccggagatggggcgctgacgatcgctggcaacagc
gtctcgggaagcggcgtttctctgccggcggatgtcgatatctcaggcggtcgcatgacg
ctgatcggatcatccgagtctggcgttggcctttccgaggcaggcggctcagtcaacgtt
tcgggaaatggcgtagcggacctctcgggtacgtcgaacgatagcagcggtgtacaaatc
gggtcggacgtcaatgtctcaggtgccggcgctctgagcgtttccggaatttcgaccaat
ggcaccggcacgttgctcgatggcgatatcaacgtgaacgacagtgcaacggtagacgtc
tcgggcacctcgacgagtggggtcggcactcaagctgatggagcgatccatgtttcgggc
gatggccggacaaccttcagaggcacatcgacgaacggcgttggcacccaagtcggaggg
gcgatcgatgtctccggcaacggccgcgtcaacgtctcaggtacctctgcgagcgacgca
ggcgtacttctcgatccgaccggctcggtgacggcatcgggtgaaggctccgcgacaatc
tcgggcaattcgatggatggcgttggcgcgcaaatcaacggaaccgtgaacgctcgcgag
aacggttcgatcattatcctgggacgctcggagaacagcactggcgcactgattgacgtc
aacggcttggcgagtgcgtcggacaacggatcgatcgatatctctggtgcgtcgacgaac
ggtagtggcgctcaagtcgatggcctggtcgacattaaggactatgcgtcgggtaacgtg
tcgggcatgtcgacgaacgcgcaagggatggccgtcggagcggacggtgtcatcaagaca
tccgataacgggtcgagccacattaccggaagcagtctgaatggtagcggcgtgagcatc
gatggcttggtcgatgtgtcgggaagtggtttggggaatatcagcggcaactcgaccaac
ggcgtaagtatggttctggggaaccatgccctgatcgccgcgagcgacaacagtgtgctg
aacgtgagcgcaccgggcaacgcgaacggctccatcgccgtgaatcagtcgggcgacgca
aaggtctacatcgactacaacattcccgataacaacggcaatacgaccccggtagacccc
accgatccgacagggccaacgaatccgacaaaccccaccgacccgacgaccaatacgccg
ggagacggcggcgtcaccaatccctcaaccggcgattcgggcggcgggagcaacagcgtc
ggcggaatcgttggaggtgtgctcggtgccgtcggtcttggcacgttgatcttgaacacc
cacggtgtgatgtacctggagcagccagtgccgttggccgtggattcgggggatgtgtcg
tactggggcgaggtgtcgctcgagcatttacagatcgatctgaacggcgatcaggcggag
atcgcccttcatactcctgacggacccgtcaaacgtcagctcaaactcctggacggcggc
gatggcgtgaagcactacacctcagtcgacgaacagaccggcatcaagtcggatctcact
ttcaacccgaagacgagcgagtacttctacacagaagcggggacaagggcgagcaaggcc
tacaaagtctcggcccacggatggctcaaggagcgggccacactcggggcgccgtcgcca
ttggcgaacgcgtcaatgccggtggatcagacggcgcatgccgcacaagtcagctcgatt
gcgaagtga
DBGET
integrated database retrieval system
