Pandoraea fibrosis: PI93_013540
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Entry
PI93_013540 CDS
T06385
Name
(GenBank) autotransporter domain-containing protein
Organism
pfib
Pandoraea fibrosis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
Motif
Other DBs
NCBI-ProteinID:
QHF15763
LinkDB
All DBs
Position
3048162..3051545
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AA seq
1127 aa
AA seq
DB search
MDTNGVTVPVPGAWGLQGTGGTGASGDGIPASDGSPAVVIASGNLTINTSMSGLDGSAGT
SGTNFATGGNGGNAGLFYSGREIFVAAALTGGAGGKGGAAVGGVGNGGGGGGGGAGMMSA
AGSAPINNSGTITGGAGGVGGSGAFGGGGGGGGDGLLALGGRADIVNTGTITGGAGGAAG
TATVAGGTGGSGGIGVNLAGTTNALANAGTISGGAGLIGGVGVRTRGNDSIVNAGLIMGG
MGNGGTTRAAAIEFGGLNNALKLLSGSVILGDLLFDAGASATIAAREPGLTLNNAVVLSD
AASNVIVSTAESSLTMSGAVSGAGTLTLGGIDSNVLTMTSVNTYTGATTIGSGTLALTGN
ASIAASSGVTVAGVGGVGGVFDISGVTAGTSIKSLSGGGAVRLGGQTLSLTNAAGTFDGV
IDGAGGVHLVGGTQTLTGVNTYSGATTVDNGAVLALTGSGSVALSSGVTNNGTLDISATT
NGASLTGLTGLGTVSLGARTLTLTQAAGVFSGTIAGTGGLTLNGGTQTLAGANTYTGATT
INAGTLALGAGGQLSSATTVTLAGSGATFDASAAGALTLSGLSGAAGTRFALGASTLTVD
AATNATYAGDLTGSGVFVKQGAGMLVLNGASSAFTGTTTVGAGALEIGDAAHESAVQGGN
VAVGSQGTLRGHGTILGNVTNGGIVAPGGSIGTLSVAGNYTQASNATLAIEVSPTTASLL
KVSGSATLNGVLAITYDPGTYRSTRYTLLSAVNGVSGRFSSVTEAVSAGTELGNLRSALS
YGANDVTLALNESASGGLGASDPSGGVVIAPKNTSVFTALGTAALMNAQSATAAVLDQAT
RRSVGTGLATGDATSDGPTVWANATGLHGRLSGADGQPGFQENRYGFLAGAHKRVAGDTF
GLAGGYSHADLSEAGTANSGMIDTLRLAAYASREIGPVDVAASVGYGLDFISQKRPFAGI
GTAQGDHIGQEFTAAAQASAPLSIAGVVVTPRVGLRYAYFHANGFDESGAGGQDLRVGTD
NTRSLQPFVGVTFDKAFGDAVRPMHAQFRAAYAHELLDAGRAITVASQDGTIFVAPGTRL
ARGYLTLGASFGVTLAKHLDVSLAYDALINTARASAQAGSLKVTYRF
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggataccaacggcgtgacggtgccggttcccggcgcttggggactacaggggacaggc
ggcaccggcgcgtccggcgacggcatcccggcgtcggacgggtcgccggcagttgtcatc
gcctccggtaacttaacgatcaacacgtcgatgagcggcctcgacggcagcgccggcacc
agcggcactaactttgccacaggtggcaatggcggcaacgccggacttttttattccggc
agagagatcttcgttgcggccgcgcttaccggcggtgccgggggcaagggcggcgccgcc
gtcggtggcgtaggcaacggtggcggcggcggcggtggcggggccggcatgatgtctgcc
gcgggatcggcgccgatcaacaattcggggacgattaccggaggggctggcggtgtcggc
ggttccggggcctttggcggtggcggtggcgggggcggcgacgggttgctcgcgctcggc
gggcgcgccgacatcgttaacacgggcacgatcacgggcggtgccggaggggccgccggt
accgctaccgtcgccggcggcacagggggcagtggcggcatcggcgtcaatctcgcgggc
acaaccaacgcgcttgccaacgcgggaaccatctcgggcggcgccggtttgatcggcggt
gtcggcgtacgtacgcgcggtaacgactcgatcgtcaatgcgggcctcatcatgggcggg
atgggtaacggtggcacgacgcgcgccgcggccatcgagttcggtggcctgaacaacgcg
ctgaagctgctgtccggctcggtgattctcggcgatctgttattcgacgcaggcgcaagt
gcgactatcgccgcccgcgaacccgggctgacgctgaacaatgctgtagttctgagcgac
gccgcctcgaacgtgattgtctctaccgcggaatccagtttgacgatgtcgggcgcggta
tcgggcgctggcacactgacgctcggcggcatcgattcgaatgttctgacgatgacgtcg
gtcaatacatacaccggagctacaacgatcggcagcggcacgctggcgctaacaggcaac
gcaagcatagcggcatcgtcgggggtgacggtggccggtgtgggcggtgtaggcggcgtg
ttcgatatttcgggcgtgacggccggcacatcgatcaaatcgctttccggaggcggcgcc
gtgcggctcggcggccagacgctgtcgctcaccaacgcggccgggacattcgatggcgtc
atcgacggcgccggcggagtacatctggtcggcggcacgcagacgctgaccggcgtgaat
acctattccggtgcgacgaccgtcgataacggcgcggtgctggccctgaccggcagcgga
agtgttgcgttgtcgagcggtgtgacgaataacggcacgctcgatatttctgcgacgacg
aatggcgcctcgctgacgggcctgacagggctggggacggtctcgctcggggcgcgcacg
ctaacgttgacgcaagcagcaggcgtcttctcaggcacgatcgccggcacaggtggcctg
acgctgaacggcggcacgcagacgctcgcgggcgcgaacacctataccggggcaacgaca
atcaatgcgggcacgctcgcgcttggcgccggcggacagttgtcgtcggcgacgacagtg
acgctggccggcagcggcgctacgttcgatgcctccgctgcgggcgcgctaaccctgtcc
ggtctttcgggtgcggcgggtacgcgcttcgcccttggcgcgagcacgctgacggtcgat
gctgcgaccaacgccacctatgccggcgatctcaccggcagcggggttttcgtcaaacag
ggcgcgggcatgctggtgctcaatggggcaagctccgctttcaccggtacgaccactgtc
ggggcaggcgcgctggagatcggcgacgccgcgcatgagagcgcagtgcagggcggcaac
gtcgcggtcggttcgcagggcacattgcgcgggcacggcacgattctcggcaacgtgacc
aacggcggcatcgtggcgccgggcgggtctatcggtacgttgagcgtcgccggaaattac
acgcaagcgtcgaatgcaacgctggcgatcgaggtcagtccgacgacggcatcgctgctc
aaggtgtcgggcagcgcgacattgaacggcgtgctcgcgattacctacgaccctggcacc
tatcggtcgacgcgatacaccctgttgagcgcggtgaacggtgtgagcggcagattttcc
tcagtgaccgaggcggtctcggccggtaccgaacttggcaatcttcgctccgccctgagc
tatggagcgaacgacgtgacactcgcgctcaacgagtcggcatccggcggcctgggggct
tccgatccgtcggggggcgtggtcattgcgcctaagaacacgagcgttttcaccgccctg
gggacggcggcgctgatgaacgcccagtcggcgacggcagcggtgctcgaccaggccacg
aggcggtccgtcgggacggggctggcgaccggcgatgccacctctgacggccccacggtc
tgggcgaacgcgacgggacttcacgggcgtttgtccggcgccgacggccagccagggttt
caggaaaaccgctacggcttcctcgcgggcgcgcacaagcgcgtggcgggcgataccttc
gggttggcaggcggctattcccatgccgatctctcggaggcgggcacggcgaactcgggc
atgatcgataccctgcggctggccgcctacgcgagtcgcgagatcggcccggtcgacgtt
gcggcatcagtcggttacggcctagatttcatatcgcagaagcgcccgttcgctggcatc
ggcacggcgcaaggtgatcatatcgggcaggagttcacggcagcggcacaggcgagcgcg
ccgttgtcgatcgccggagtggtggtcacgccgcgtgtcggtttgcgttatgcctatttc
cacgccaacggcttcgacgaaagcggggcgggtggacaggatctgcgtgttgggacggac
aatacacgcagccttcagccgttcgtgggcgtaacgttcgataaggcattcggagatgcg
gtgcgtccgatgcatgcgcaatttcgcgctgcctatgcccacgaattgctcgatgccgga
cgggcaatcaccgtggcctcacaggacggcacgattttcgtggcgccgggcacgcgcctg
gcgcgcggctatctgacgcttggcgcgagcttcggcgtcacgctcgctaagcatctggac
gtctccctcgcctacgatgcgctcatcaacaccgctcgcgcatctgcgcaggcgggcagc
ctgaaggtgacctaccggttctga
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integrated database retrieval system
