Pandoraea fibrosis: PI93_013620
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Entry
PI93_013620 CDS
T06385
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib00010
Glycolysis / Gluconeogenesis
pfib00020
Citrate cycle (TCA cycle)
pfib00260
Glycine, serine and threonine metabolism
pfib00280
Valine, leucine and isoleucine degradation
pfib00310
Lysine degradation
pfib00380
Tryptophan metabolism
pfib00620
Pyruvate metabolism
pfib00630
Glyoxylate and dicarboxylate metabolism
pfib00640
Propanoate metabolism
pfib00670
One carbon pool by folate
pfib00785
Lipoic acid metabolism
pfib01100
Metabolic pathways
pfib01110
Biosynthesis of secondary metabolites
pfib01120
Microbial metabolism in diverse environments
pfib01200
Carbon metabolism
pfib01210
2-Oxocarboxylic acid metabolism
pfib01240
Biosynthesis of cofactors
Module
pfib_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfib_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pfib_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pfib_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
PI93_013620 (lpdA)
00020 Citrate cycle (TCA cycle)
PI93_013620 (lpdA)
00620 Pyruvate metabolism
PI93_013620 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
PI93_013620 (lpdA)
00640 Propanoate metabolism
PI93_013620 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PI93_013620 (lpdA)
00280 Valine, leucine and isoleucine degradation
PI93_013620 (lpdA)
00310 Lysine degradation
PI93_013620 (lpdA)
00380 Tryptophan metabolism
PI93_013620 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PI93_013620 (lpdA)
00670 One carbon pool by folate
PI93_013620 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfib04147
]
PI93_013620 (lpdA)
Enzymes [BR:
pfib01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
PI93_013620 (lpdA)
Exosome [BR:
pfib04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
PI93_013620 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
HI0933_like
FAD_binding_2
FAD_oxidored
NAD_binding_8
GIDA
AlaDh_PNT_C
FAD_binding_3
3HCDH_N
Thi4
2-Hacid_dh_C
Lycopene_cycl
DAO
Amino_oxidase
Agglutinin_C
Motif
Other DBs
NCBI-ProteinID:
QHF13564
LinkDB
All DBs
Position
3073325..3074755
Genome browser
AA seq
476 aa
AA seq
DB search
MANKEFDVVVIGAGPGGYIAAIRAAQLGFSVACVEKWTNPAGKMVLGGTCLNVGCIPSKA
LLASSEEFEKVGHHLAEHGITTSDVKIDIEKMLTRKQGIVDKMTGGIEYLFKKNKITWLK
GHGKIVGKSDAGYQIDVASDPAESVIAKNLIIATGSKARHLPGMAVDNKLISDNEGALSF
DTVPKKLGVIGAGVIGLELGSVWRRLGAEVTVLEALPDFLAAADAGVAKEAAKQFKKQGL
DITVGAKVSEVKTGKNSVTVSYTDKEGNAKTLEVDRLIVSVGRVPNTENLGLDKIGLATD
ERGFIPVDDHCRTKLPNVYAIGDVVRGPMLAHKAEDEGVLVAEVIAGQKPHIDYNCIPWV
IYTSPEIAWVGKTEQQLKAEGREFKPGQFPFAANGRALGMGSSDGFVKVLADAKTDEILG
VHVIGLNASDLIAEAVVAMEFKAASEDIGRICHPHPSLSEVMREAALDVEKRALNK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaagaatttgatgtcgtcgttatcggcgccggccctggcggttatatcgcc
gctatccgcgccgcacaacttggtttctcggtcgcttgcgtcgaaaagtggaccaacccg
gccggcaagatggtgctgggcggtacctgcctgaacgtcggttgcatcccgtcgaaggca
ctgctggcctcgtcggaagagttcgaaaaggtcggtcatcacctggccgagcacggtatc
accacgtcggatgtcaagatcgacatcgagaagatgctcacgcgcaagcaaggcatcgtc
gacaagatgacgggcggtatcgagtacctgttcaagaagaacaagatcacgtggctcaag
gggcacggcaagatcgtcggcaagagcgatgccggctatcagatcgatgtggcgagcgac
ccggccgagtcggtcatcgccaagaacctcatcattgccacgggttcgaaggcgcgtcat
ctgccgggcatggcggtcgacaacaagctcatctcggataacgaaggtgcgctctcgttc
gacaccgtgccgaagaagctgggcgtgatcggcgctggcgtgatcggtctggaactgggg
tcggtgtggcgtcgtctgggtgccgaagtgaccgtgctcgaagccttgccggacttcctc
gcagccgccgacgccggcgttgccaaggaagccgcgaagcagttcaagaagcaaggtctg
gacatcaccgttggcgcgaaggtcagcgaagtgaagaccggcaagaacagcgtgaccgtc
agctacaccgacaaggaaggcaacgccaagacgctggaagtcgaccgtctgatcgtgtcg
gttggccgtgtgccgaacacggaaaatctgggcctggacaagatcggtctggcgaccgac
gagcgcggcttcattccggtggatgaccactgccgtaccaagctgccgaacgtgtatgcg
atcggtgacgtggtacgtggcccgatgctcgcgcacaaggccgaagacgaaggcgtgctg
gtcgccgaagtcatcgccggccagaagccgcacatcgattacaactgcattccgtgggtg
atctacacctcgccggaaatcgcctgggtcggcaagaccgagcagcagttgaaggccgaa
ggccgtgagttcaagccgggccagttcccgttcgcggccaacggccgcgcactgggcatg
ggctcgtcggacggtttcgtgaaggtgctggccgacgccaagaccgacgaaatcctcggc
gtgcacgtgatcggtctgaatgcttcggatctgatcgccgaagccgtggtggcgatggag
ttcaaggccgcgtcggaagacatcggccgtatctgccacccgcacccgtcgctgtcggaa
gtgatgcgtgaagccgctctcgacgtcgagaagcgcgcgctgaacaagtaa
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