KEGG   Pandoraea fibrosis: PI93_013620
Entry
PI93_013620       CDS       T06385                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pfib  Pandoraea fibrosis
Pathway
pfib00010  Glycolysis / Gluconeogenesis
pfib00020  Citrate cycle (TCA cycle)
pfib00260  Glycine, serine and threonine metabolism
pfib00280  Valine, leucine and isoleucine degradation
pfib00310  Lysine degradation
pfib00380  Tryptophan metabolism
pfib00620  Pyruvate metabolism
pfib00630  Glyoxylate and dicarboxylate metabolism
pfib00640  Propanoate metabolism
pfib00670  One carbon pool by folate
pfib00785  Lipoic acid metabolism
pfib01100  Metabolic pathways
pfib01110  Biosynthesis of secondary metabolites
pfib01120  Microbial metabolism in diverse environments
pfib01200  Carbon metabolism
pfib01210  2-Oxocarboxylic acid metabolism
pfib01240  Biosynthesis of cofactors
Module
pfib_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pfib_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pfib_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pfib_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pfib00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PI93_013620 (lpdA)
   00020 Citrate cycle (TCA cycle)
    PI93_013620 (lpdA)
   00620 Pyruvate metabolism
    PI93_013620 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    PI93_013620 (lpdA)
   00640 Propanoate metabolism
    PI93_013620 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PI93_013620 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    PI93_013620 (lpdA)
   00310 Lysine degradation
    PI93_013620 (lpdA)
   00380 Tryptophan metabolism
    PI93_013620 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PI93_013620 (lpdA)
   00670 One carbon pool by folate
    PI93_013620 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pfib04147]
    PI93_013620 (lpdA)
Enzymes [BR:pfib01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PI93_013620 (lpdA)
Exosome [BR:pfib04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PI93_013620 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 HI0933_like FAD_binding_2 FAD_oxidored NAD_binding_8 GIDA AlaDh_PNT_C FAD_binding_3 3HCDH_N Thi4 2-Hacid_dh_C Lycopene_cycl DAO Amino_oxidase Agglutinin_C
Other DBs
NCBI-ProteinID: QHF13564
LinkDB
Position
3073325..3074755
AA seq 476 aa
MANKEFDVVVIGAGPGGYIAAIRAAQLGFSVACVEKWTNPAGKMVLGGTCLNVGCIPSKA
LLASSEEFEKVGHHLAEHGITTSDVKIDIEKMLTRKQGIVDKMTGGIEYLFKKNKITWLK
GHGKIVGKSDAGYQIDVASDPAESVIAKNLIIATGSKARHLPGMAVDNKLISDNEGALSF
DTVPKKLGVIGAGVIGLELGSVWRRLGAEVTVLEALPDFLAAADAGVAKEAAKQFKKQGL
DITVGAKVSEVKTGKNSVTVSYTDKEGNAKTLEVDRLIVSVGRVPNTENLGLDKIGLATD
ERGFIPVDDHCRTKLPNVYAIGDVVRGPMLAHKAEDEGVLVAEVIAGQKPHIDYNCIPWV
IYTSPEIAWVGKTEQQLKAEGREFKPGQFPFAANGRALGMGSSDGFVKVLADAKTDEILG
VHVIGLNASDLIAEAVVAMEFKAASEDIGRICHPHPSLSEVMREAALDVEKRALNK
NT seq 1431 nt   +upstreamnt  +downstreamnt
atggcaaataaagaatttgatgtcgtcgttatcggcgccggccctggcggttatatcgcc
gctatccgcgccgcacaacttggtttctcggtcgcttgcgtcgaaaagtggaccaacccg
gccggcaagatggtgctgggcggtacctgcctgaacgtcggttgcatcccgtcgaaggca
ctgctggcctcgtcggaagagttcgaaaaggtcggtcatcacctggccgagcacggtatc
accacgtcggatgtcaagatcgacatcgagaagatgctcacgcgcaagcaaggcatcgtc
gacaagatgacgggcggtatcgagtacctgttcaagaagaacaagatcacgtggctcaag
gggcacggcaagatcgtcggcaagagcgatgccggctatcagatcgatgtggcgagcgac
ccggccgagtcggtcatcgccaagaacctcatcattgccacgggttcgaaggcgcgtcat
ctgccgggcatggcggtcgacaacaagctcatctcggataacgaaggtgcgctctcgttc
gacaccgtgccgaagaagctgggcgtgatcggcgctggcgtgatcggtctggaactgggg
tcggtgtggcgtcgtctgggtgccgaagtgaccgtgctcgaagccttgccggacttcctc
gcagccgccgacgccggcgttgccaaggaagccgcgaagcagttcaagaagcaaggtctg
gacatcaccgttggcgcgaaggtcagcgaagtgaagaccggcaagaacagcgtgaccgtc
agctacaccgacaaggaaggcaacgccaagacgctggaagtcgaccgtctgatcgtgtcg
gttggccgtgtgccgaacacggaaaatctgggcctggacaagatcggtctggcgaccgac
gagcgcggcttcattccggtggatgaccactgccgtaccaagctgccgaacgtgtatgcg
atcggtgacgtggtacgtggcccgatgctcgcgcacaaggccgaagacgaaggcgtgctg
gtcgccgaagtcatcgccggccagaagccgcacatcgattacaactgcattccgtgggtg
atctacacctcgccggaaatcgcctgggtcggcaagaccgagcagcagttgaaggccgaa
ggccgtgagttcaagccgggccagttcccgttcgcggccaacggccgcgcactgggcatg
ggctcgtcggacggtttcgtgaaggtgctggccgacgccaagaccgacgaaatcctcggc
gtgcacgtgatcggtctgaatgcttcggatctgatcgccgaagccgtggtggcgatggag
ttcaaggccgcgtcggaagacatcggccgtatctgccacccgcacccgtcgctgtcggaa
gtgatgcgtgaagccgctctcgacgtcgagaagcgcgcgctgaacaagtaa

KEGG   Pandoraea fibrosis: PI93_017670
Entry
PI93_017670       CDS       T06385                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pfib  Pandoraea fibrosis
Pathway
pfib00010  Glycolysis / Gluconeogenesis
pfib00020  Citrate cycle (TCA cycle)
pfib00260  Glycine, serine and threonine metabolism
pfib00280  Valine, leucine and isoleucine degradation
pfib00310  Lysine degradation
pfib00380  Tryptophan metabolism
pfib00620  Pyruvate metabolism
pfib00630  Glyoxylate and dicarboxylate metabolism
pfib00640  Propanoate metabolism
pfib00670  One carbon pool by folate
pfib00785  Lipoic acid metabolism
pfib01100  Metabolic pathways
pfib01110  Biosynthesis of secondary metabolites
pfib01120  Microbial metabolism in diverse environments
pfib01200  Carbon metabolism
pfib01210  2-Oxocarboxylic acid metabolism
pfib01240  Biosynthesis of cofactors
Module
pfib_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pfib_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pfib_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pfib_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pfib00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PI93_017670 (lpdA)
   00020 Citrate cycle (TCA cycle)
    PI93_017670 (lpdA)
   00620 Pyruvate metabolism
    PI93_017670 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    PI93_017670 (lpdA)
   00640 Propanoate metabolism
    PI93_017670 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PI93_017670 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    PI93_017670 (lpdA)
   00310 Lysine degradation
    PI93_017670 (lpdA)
   00380 Tryptophan metabolism
    PI93_017670 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PI93_017670 (lpdA)
   00670 One carbon pool by folate
    PI93_017670 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pfib04147]
    PI93_017670 (lpdA)
Enzymes [BR:pfib01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PI93_017670 (lpdA)
Exosome [BR:pfib04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PI93_017670 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA Pyr_redox_3 NAD_binding_8 GCV_H FAD_binding_2 Biotin_lipoyl_2 Thi4 FAD_binding_3 AlaDh_PNT_C HI0933_like RnfC_N 3HCDH_N
Other DBs
NCBI-ProteinID: QHF14272
LinkDB
Position
complement(4015314..4017092)
AA seq 592 aa
MSLIEVKVPDIGAEGVDVIEVMIKPGDKIAKEASLITLESDKASMEVPSEVSGTVKEVKI
KVGDKASQGTLIALIEADDAGAGKSATPAAAPAPAAPSAPAAAPAAQPSAPAPAVAKHSG
GADTECDVLVLGAGPGGYSAAFRSADMGRKTVLVERYATLGGVCLNVGCIPSKALLHTAA
VLEEAQSLGHHGISFGKPEVDLDKLRAYKESVVGKLTGGLAGMAKMRKVEVVRGVGTFLD
PNHIEVVAEDGSKRTVKFAQAIIAAGSQAVKLPFLPEDPRIVDSTGALELRQLPKKMLVI
GGGIIGLEMATVYSALGTEIDVVEMLDGLMQGADRDLVKVWEKMNAKRFGRVMLKTKTVG
AEAKPDGIYVKFEGEAAPAEPQRYDLVLVAVGRSPNGKKIGAERAGVSVGDRGFISVDKQ
MRTNVPNIFAIGDIVGQPMLAHKAVHEAHVAAEAAAGEKAYFDAIQIPSVAYTDPEVAWA
GKTEDQLKAEGVKYGKAVFPWAASGRAIANGRDEGFTKLLFDEETHRIVGGAIVGTHAGD
LIGELCLAVEMGADAVDIGKTIHPHPTLAESIGMAAEIYEGVCTDVPPARKK
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgagtctcatcgaagtcaaagtgccggacatcggcgcagagggcgtggatgtcatcgaa
gtgatgatcaagcccggcgacaagatcgccaaggaagcgtcgctcatcacgctggagtcc
gacaaggcttccatggaagtgccgtccgaagtgtcgggcacggtcaaggaagtgaaaatc
aaggtgggcgacaaggccagccaaggcacactgatcgcgcttatcgaagccgatgacgcg
ggtgccggcaagtcggcaacccccgcggctgcgcccgcgccggccgccccttcagcacct
gcggccgctcccgcagcgcaaccgagcgccccggcgccggccgttgccaagcacagtggt
ggcgcagacaccgagtgcgatgtgctcgtgctgggtgccggtccgggcggatactccgcg
gctttccgcagtgccgacatgggtcgcaagacggtcctcgtcgagcgctacgcaacgctt
ggcggcgtttgcctgaacgtgggttgcatcccctcgaaggcattgctccacacggcggca
gtcctcgaagaggcgcaatcgctgggccatcacggtatctcgttcggcaagccggaagtc
gatctcgacaagctgcgtgcctacaaggaaagcgtcgttggcaagctcacgggcggtctg
gccggcatggccaagatgcgcaaagtggaagtcgtgcgcggcgtgggcacgttcctcgat
ccgaatcacatcgaagtcgtggccgaagacggcagcaagcgcacggtgaagtttgcacaa
gcgatcatcgctgcgggttcacaagcagtgaagctgccgttcctgccggaagatccgcgc
atcgtcgactcgaccggcgcactcgaactgcgtcaactgccgaagaagatgctggtcatc
ggtggcggcatcatcggcctcgaaatggcgacggtctatagtgccctggggaccgagatc
gacgtcgtggaaatgctcgatggcctgatgcaaggtgcggatcgcgatctggtcaaggtc
tgggaaaagatgaacgcgaagcgttttggccgcgtcatgctcaagaccaagacggtgggt
gccgaggccaagccagatggcatctatgtgaagttcgagggcgaggccgcgccggccgag
ccgcaacgctacgatctggtgctcgtcgctgtgggccgtagcccgaacgggaagaagatc
ggtgccgagcgcgccggcgtgtcggtgggcgatcgcgggttcatctccgtcgacaagcaa
atgcgcaccaacgtgccgaacatcttcgcgatcggcgatatcgtgggacagccgatgctt
gcccacaaggccgtgcacgaagcgcacgttgccgccgaagcggccgcaggcgagaaggcg
tacttcgatgcgatccagattccgtcggtggcctacaccgatccggaagtggcctgggct
ggcaagacggaagaccaactgaaggcggaaggcgtgaagtacggcaaggcagtgttcccg
tgggccgcctcgggccgtgcgattgccaatggccgtgacgaaggcttcaccaagctgctg
ttcgacgaggagacgcatcgcatcgttggcggcgcgatcgtcggtacccatgccggggat
ctgatcggtgaattgtgtctggccgtcgaaatgggcgcagacgctgtcgacatcggcaag
acgattcatccgcacccgacgctggccgaatcgatcggcatggccgcggagatttacgaa
ggggtttgcaccgacgtaccgccggctcgcaagaagtag

KEGG   Pandoraea fibrosis: PI93_023810
Entry
PI93_023810       CDS       T06385                                 
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
  KO
K00281  glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
Organism
pfib  Pandoraea fibrosis
Pathway
pfib00260  Glycine, serine and threonine metabolism
pfib00630  Glyoxylate and dicarboxylate metabolism
pfib00670  One carbon pool by folate
pfib00785  Lipoic acid metabolism
pfib01100  Metabolic pathways
pfib01110  Biosynthesis of secondary metabolites
pfib01200  Carbon metabolism
Module
pfib_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pfib00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    PI93_023810 (gcvP)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PI93_023810 (gcvP)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PI93_023810 (gcvP)
   00670 One carbon pool by folate
    PI93_023810 (gcvP)
Enzymes [BR:pfib01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.4  With a disulfide as acceptor
    1.4.4.2  glycine dehydrogenase (aminomethyl-transferring)
     PI93_023810 (gcvP)
SSDB
Motif
Pfam: GDC-P GcvP2_C Beta_elim_lyase Aminotran_5 FANC_SAP Aminotran_1_2
Other DBs
NCBI-ProteinID: QHF15332
LinkDB
Position
complement(5395648..5398575)
AA seq 975 aa
MNALTDLQAPRRSLAELEQRDNFSARHIGPDTPEQQAMLAELGYASRAALIDAVVPASIR
RDSGQFATSLGQFAAPKTESQALAQLRALADQNQVFKSFIGQGYFNTFTPGVILRNVLEN
PAWYTAYTPYQPEISQGRLEALLNYQQMIIDMTGLAIANASMLDEATAAAEAMTLVKRTG
KSKSNTFFVADDVLPQTIEVVQTRAKPLGIEVQIGPVAAATEVDAFGVLVQYPGVGGDVR
DYRALADAIHAKGGMLIAAADLLSLTLLTPPGEWGADVAVGNSQRFGVPMGFGGPHAAYL
ATRDELKRSMPGRLVGVSVDSQGKPALRLALQTREQHIRREKATSNICTAQALLAIMASM
YAAYHGPQGLRVIAERVHRLTAVLAAGLTTLGAAPRNATFFDTLTVPVSGRADTVHTVAA
ARRFNLRREDDNTVGISLDETSTRDDVIALWEVVAEGLGKSAVSLDFDAIEATVSNGYPL
ALARQSQYLTHPVFNRYHSEHEMLRYLRSLSDKDLALDRTMIPLGSCTMKLNATSEMLPV
TWPEFGQIHPFAPTEQTVGYRSMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIQA
YHASRGEAHRDICLIPASAHGTNPASAQMAGMQVVVVACDANGNVDLADLQAKAEQHRDR
LAAIMMTYPSTHGVFEAGARQICEIVHANGGQVYVDGANMNAMVGLCAPGEFGGDVSHLN
LHKTFCIPHGGGGPGVGPVAVGAHLAQFLPNQRSTGYSRDADGIGAVSAAPYGSASILPI
SWMYVAMMGAQGLTAATETAILNANYLAKKLAPHYPVLYSGPGGLVAHECILDLRPLKDT
SGITVDDVAKRLMDFGFHAPTMSFPVPGTLMVEPTESESKHELDRFIEAMVAIREEIRAV
EEGRADREDNPLKHAPHTADVVTADEWPHAYARSQAAYPVKALRERKYWPPVGRADNVYG
DRNLFCACVPMSDYE
NT seq 2928 nt   +upstreamnt  +downstreamnt
atgaatgctttgactgacctgcaagccccgcgccgctcgctcgccgagcttgagcagcgc
gataacttctccgcgcgccacatcggcccggacacccccgaacaacaggcgatgctcgcc
gaactgggttatgcctcgcgcgccgcactgatcgacgcggtcgttcccgcatcgattcgc
cgcgacagcggccagttcgccacgtcgctcggccagttcgctgcgccgaaaaccgagtcg
caggcgctggcgcaattgcgcgcgctcgccgaccagaatcaggtcttcaagtcgttcatc
ggtcagggctacttcaacacgttcacgccgggcgtgatcctgcgcaacgtgctcgagaac
ccggcctggtacacggcctacaccccgtatcagccggaaatctcgcagggccgcctcgaa
gcgctgctcaactaccagcagatgatcatcgacatgacggggctggcgatcgccaacgcg
tcgatgctcgacgaagcgaccgctgccgccgaggcgatgacactggtcaagcgcacgggc
aagtcgaagtcgaacacgttcttcgtggccgacgacgtgctgccgcagaccatcgaagtg
gtgcaaacgcgtgccaagccgctgggcattgaggtccagatcggcccggtggccgccgcc
accgaagtcgatgccttcggcgtgctggtgcaataccccggtgtgggcggcgacgtgcgc
gattaccgcgcgctggccgatgcgatccatgccaagggcggcatgctgatcgctgccgcc
gatctgctgtcgctcacgctgctcacgcccccgggcgagtggggggccgacgtggccgtc
ggtaacagccagcgttttggcgtgccgatgggcttcggtggcccgcacgcggcgtatctg
gccacgcgcgacgagctcaagcgctcgatgccgggccgtctggtcggcgtgtcggtcgat
tcgcaaggcaagcctgccctgcgtctggcgctgcaaacgcgcgaacaacacattcgccgc
gagaaggcgacgtcgaatatctgtaccgcacaggcattgctcgccatcatggccagcatg
tacgccgcgtatcatggcccgcaggggctgcgtgtcatcgccgagcgtgtgcatcgtctg
acggccgtgctggccgccggtctcaccacgctgggcgccgccccgcgcaacgccacgttc
ttcgacacgctcaccgtgccggtgagcggccgtgccgataccgtccatacggtggccgcc
gcacgccgcttcaacctgcgtcgcgaagacgacaacaccgtgggcatctcgctcgacgag
acgagcacccgtgacgacgtgatcgcgctgtgggaagtggtagccgaaggcctcggcaag
agcgctgtctcgctggacttcgacgccatcgaagccacggtgtcgaacgggtatccgctg
gcgctcgcgcgtcaaagccaatacctgacgcacccggtattcaaccgttatcactccgaa
cacgaaatgctgcgttacctgcgcagcctgtcggacaaggatctggcgctcgaccgcacg
atgattccgctcggttcgtgcacgatgaagctcaacgccacctcggaaatgctgccggtg
acctggccggaattcggtcagattcacccgttcgccccgacggaacaaacggtcggctat
cgctcgatgatcgatcagctcgagcagatgctggtggcggccaccggctacgcggccgtg
tcgctgcaaccgaacgccggctcgcagggcgagtacgccggtctgctcatcatccaggcg
tatcacgcgtcgcgcggtgaagcgcatcgcgacatctgcctgatccccgcctccgcgcac
ggcacgaacccggcgtcggcgcagatggccggcatgcaggtcgtggtggttgcgtgcgac
gcgaacggcaacgtcgatctggccgatctgcaggcgaaggccgagcagcatcgtgatcgt
ctggccgcgatcatgatgacgtacccgtccacgcacggcgtgttcgaagccggtgcccgt
cagatctgcgagatcgtgcatgcgaacggcggtcaggtgtatgtcgacggcgcgaacatg
aacgcgatggtgggcctgtgcgcaccgggcgagttcggtggcgacgtctcgcatctgaac
ctgcacaagacattctgcatcccgcacggcggtggcggcccgggcgtggggccggtggcc
gtgggcgcacatctggcccagttcctgccgaatcagcgctcgacgggctattcgcgcgac
gctgacggcatcggtgctgtgtcggccgcgccatacggttcggcgtcgattctgccgatc
tcgtggatgtacgttgccatgatgggcgcgcaggggctgacggccgcgacggaaacggcc
atcctcaatgcgaactacctcgcgaagaagcttgcaccgcattacccggtgctgtactcg
ggcccgggcggcctcgtcgcgcacgagtgcattctggatctgcgtccgctcaaggacacc
agcggcatcaccgtggacgacgttgcgaagcgcctgatggacttcggtttccacgcgccg
acgatgagcttcccggtgccgggcacgctgatggtcgagccgaccgagtcggaatcgaag
cacgaactcgaccgcttcatcgaagcgatggtcgcgatccgcgaggaaatccgcgcggtg
gaagagggtcgtgccgatcgcgaggacaatccgctcaagcacgcgccgcacacggccgac
gtcgtgacggcggacgaatggccgcacgcctacgcccgcagtcaggctgcgtacccggtg
aaggcactgcgcgagcgcaagtactggccgccggtgggacgtgccgataacgtctacggc
gaccggaacctgttctgcgcctgcgtaccgatgagcgactacgagtaa

KEGG   Pandoraea fibrosis: PI93_023815
Entry
PI93_023815       CDS       T06385                                 
Symbol
gcvH
Name
(GenBank) glycine cleavage system protein GcvH
  KO
K02437  glycine cleavage system H protein
Organism
pfib  Pandoraea fibrosis
Pathway
pfib00260  Glycine, serine and threonine metabolism
pfib00630  Glyoxylate and dicarboxylate metabolism
pfib00670  One carbon pool by folate
pfib00785  Lipoic acid metabolism
pfib01100  Metabolic pathways
pfib01110  Biosynthesis of secondary metabolites
pfib01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:pfib00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    PI93_023815 (gcvH)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PI93_023815 (gcvH)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PI93_023815 (gcvH)
   00670 One carbon pool by folate
    PI93_023815 (gcvH)
SSDB
Motif
Pfam: GCV_H Biotin_lipoyl
Other DBs
NCBI-ProteinID: QHF15333
LinkDB
Position
complement(5398687..5399070)
AA seq 127 aa
MANIPDKLKYTESDEWARLEADGTVTVGITDFAQESLGDIVFVELPDTGRVVAADEASTV
IESVKAAADVHSPVSGEIIETNTEVSGSPDLVNSDAYDNWLFRVKPSNVAELDKLLSAEQ
YAKKIGG
NT seq 384 nt   +upstreamnt  +downstreamnt
atggcgaatatccccgataaactgaagtacaccgagtccgacgaatgggctcgcctcgaa
gccgacggcaccgtgaccgtgggcatcaccgatttcgcacaggagtccctgggcgacatc
gtgttcgtcgagctgccggataccggccgcgtggtggccgccgatgaggcatcgaccgtg
atcgaatcggtcaaggctgcggctgacgtccactcgccggtcagcggcgagatcatcgag
accaacacggaagtgtcgggctcgccggatctggtcaatagcgacgcttacgacaactgg
ctgttccgcgtgaagccgtcgaacgttgccgagcttgacaagctgctgagcgccgagcaa
tacgccaagaagatcggcggctga

KEGG   Pandoraea fibrosis: PI93_023820
Entry
PI93_023820       CDS       T06385                                 
Symbol
gcvT
Name
(GenBank) glycine cleavage system aminomethyltransferase GcvT
  KO
K00605  glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
Organism
pfib  Pandoraea fibrosis
Pathway
pfib00260  Glycine, serine and threonine metabolism
pfib00630  Glyoxylate and dicarboxylate metabolism
pfib00670  One carbon pool by folate
pfib00785  Lipoic acid metabolism
pfib01100  Metabolic pathways
pfib01110  Biosynthesis of secondary metabolites
pfib01200  Carbon metabolism
Module
pfib_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pfib00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    PI93_023820 (gcvT)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PI93_023820 (gcvT)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PI93_023820 (gcvT)
   00670 One carbon pool by folate
    PI93_023820 (gcvT)
Enzymes [BR:pfib01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.10  aminomethyltransferase
     PI93_023820 (gcvT)
SSDB
Motif
Pfam: GCV_T GCV_T_C POPLD
Other DBs
NCBI-ProteinID: QHF15334
LinkDB
Position
complement(5399149..5400255)
AA seq 368 aa
MTELKRTPLNDTHRAAGARMVDFGGWDMPVNYGSQIEEHNAVRTDAGMFDVSHMCVVDLH
GPSCREFLRFAVANNVDKLQTPGKALYTCMLNPSGGVIDDLIIYFIAEDWFRVVVNAGTA
DKDLAWLGQLNAHGDYSLTITPRRDLSIVAVQGPNARAKLWQAVPGSQDVSEALKPFNAA
FAKDTPFGELMIARTGYTGEDGFEVIVNADHVAALWNALVAVGVRPAGLGARDTLRLEAG
MNLYGQDMDDDVSPLDAGLGWTVEKESERTFVGKDSLLSRGQTWRFAGLVLDGKGGVLRA
HQVVVTEAGDGEITSGTFSPSLQQSIAFARLPKGVPDGAIVHVQIRDKQLPARVVKLPFV
RHGKAVVA
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgaccgaactcaaacgtactccgctcaacgatacgcaccgcgctgccggcgcccgcatg
gtcgatttcggcggctgggacatgcccgtgaactacggctcccagatcgaagagcacaac
gccgtgcgcaccgacgccggtatgttcgacgtctcgcacatgtgtgtggtcgatctgcat
ggcccgagctgccgcgaattcctgcgtttcgccgttgccaataacgtcgacaagctgcaa
accccgggcaaggcgctctacacctgcatgctcaacccgagcggcggtgtgatcgacgac
ctcatcatctatttcatcgccgaagactggttccgtgttgtagtgaacgccggcacggcc
gacaaggatctcgcctggctcggtcagctcaacgcccacggcgactacagcctgacgatc
accccacgccgcgatctgtccatcgttgccgtgcagggcccgaatgcacgcgccaagctc
tggcaagccgtgccgggcagtcaggacgtgagcgaagcgctcaagccgttcaacgcggca
ttcgccaaggacaccccgttcggcgaattgatgatcgcgcgcaccggctacaccggcgaa
gacggcttcgaagtcatcgtgaacgccgaccatgtggcggcgctgtggaacgcgctggtc
gcggtgggcgtgcgcccggccgggctgggggcgcgcgacacgctgcgtctggaggccggc
atgaatctgtacggtcaggacatggacgacgacgtgtcgccgctcgatgccggcctcggc
tggacggtcgagaaggaaagcgagcgcacgttcgtcggcaaggattctttgctctcgcgc
ggtcagacgtggcgcttcgcgggcctcgtgctcgacggcaagggcggagtgctgcgcgcg
catcaggtcgtggtgaccgaggcgggcgatggcgaaatcaccagcggcacgttcagcccg
agccttcaacaatcgattgcatttgcccgcctgccgaagggtgtgccggacggcgccatc
gtccatgtgcaaattcgtgacaagcaattgcccgcacgtgtggtcaaattaccgttcgtg
cgtcacggcaaggccgtggtggcctaa

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