Pandoraea fibrosis: PI93_014520
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Entry
PI93_014520 CDS
T06385
Name
(GenBank) response regulator
KO
K07677
two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:
2.7.13.3
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PI93_014520
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pfib01001
]
PI93_014520
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pfib02022
]
PI93_014520
Enzymes [BR:
pfib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
PI93_014520
Protein kinases [BR:
pfib01001
]
Histidine kinases
NarL family
PI93_014520
Two-component system [BR:
pfib02022
]
NarL family
RcsC-RcsD-RcsB (capsule synthesis)
PI93_014520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
Response_reg
Hpt
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
QHF13718
LinkDB
All DBs
Position
3282730..3286101
Genome browser
AA seq
1123 aa
AA seq
DB search
MTRDIAIAGRLLRGGGLLALLFGLSVWAAAVSYGLFGMVWQGAQKTAAFFATVGHEVRDV
EIFNEQASSMAQATLASSVRPGGVTQSLTERILKPLLAMPEGTAKRVVGAGWDDEFQIVK
LADIAPERAEVLARLTLRLMNLDANFWSALGGQDETFIISADGAFAAYRTSTDMTSVSAD
GLAQDARSMLSEINKVERYAARVHAGQDGPFWTYNYQNVITHETVVSSFVPIRDLDGHLM
LYVGTSMAPDRIIPPRLRTLEHTGEALQLVSPDGFVVASAGASLSPLGPLRTIVTLPMFG
DAQMVLRHDGERVVFERHLASSPWFVRYAVRPVDLLQQSATLLIGATLLLFLYAAGIYAG
MRYMRQRIIEPARRRTTALLERDAFTQTLIETAPVGMAIIDPFEPAMVMSNPAYAGTVDL
LRHLGDGELARMYRQLHSGVVARPVRRLLSALDDAGERHYAVSFVDTVFREQPVLIGTLS
DVTEQRRFELEQRKARLAAESANRAKDVFLTTVSHEMRTPLYGTLASIELLSAQNLGDDH
RYYVDVMESSTRNLLDLINDLLDYSRIQVGRFELNSRDCSLLKELEAVGLSFTGRARLQG
LTLDWMIDPQLSRAVHTDALRLGQVVTNLVGNAIKFTEKGHVAFSAMVSRADAQGCDVVF
TVSDSGVGIASADLADLFRPFGKSTNEPGMQHGTGLGLAISHQFVGMLGGALQVESQEGA
GTTMRFTLHLPWAPDSTAVLAPATGETFAYVSGLVRRHWYLDALIRRAGYTPVRYDDAVA
WSSGSGRMQDAGLLMFADEWPVRGMAGAEVYLLRATPVDRLSGSAPVWPRDIALFQQAEL
WDALGTVTSPGDAESELTASGGGSARTRVKPLAGWYVLVADDHPISGMLLSRQLEGLGAM
VDCYHDPREALDAFDAESHMLVITDANMPHLSGHALATEIKARAPHVPVVVATADVTLRH
DREADSPFDAVVYKPVDARSLLRVIELVRGRYPSLCVEIAPLPASSRVLEGDATAPPDTT
STKDWRLPLPEMLDTFVKIADQDIANCRTALAELSRDELRHSAHRLRGGFMAFGLSPLAS
LAAQVEHLAPQASAGQMEAAFDALDAAWNDWLRAQGQAIASDA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtgacatcgcgattgccggccgcctgctccgtggcgggggcctgttggcattg
ctttttggactgtctgtctgggctgcggccgtctcatacggattgttcggcatggtgtgg
caaggcgcccagaagacggcagcctttttcgccaccgtcgggcatgaggttcgcgatgtc
gaaattttcaacgagcaggccagcagcatggcgcaagccacactggcaagttcggttcgc
ccgggcggcgtcacgcaatcgctcactgagagaattctgaagccgctgctcgcgatgccg
gagggcaccgcgaagcgcgttgtcggcgccggttgggacgatgaatttcagatcgtcaag
ctggcggatattgcccctgaacgtgcggaggtattggcgcgactcacgcttcggctgatg
aatctcgacgccaatttctggagcgcactcggcgggcaggacgaaaccttcatcatctcg
gcggacggtgcttttgccgcataccgaacgagcaccgatatgacgtcggtgagtgcagac
ggtctcgcgcaagacgcacggtcgatgctctcggaaatcaacaaggtcgaacgttacgcg
gcacgtgtgcatgccgggcaagatggtcccttctggacctacaactaccaaaatgtcatc
acccacgagacggtcgtttcgagcttcgtgccgatccgtgatctcgacgggcatttgatg
ctctatgtcggcaccagcatggcgcccgaccgaatcattcccccgcgtctgcgaacgctg
gagcacacgggcgaagcgctccagttggtgtcgccagacggcttcgtcgtggcgagcgcc
ggcgcgtcactctcgccgttggggccattgcgcacgatcgtcacgttgcctatgttcggc
gatgcgcaaatggtcttgcggcatgacggcgaacgcgtcgtcttcgagcgccatctcgcg
tcgtcgccgtggttcgtgcgctacgccgttcgacccgtggacctgttgcagcaaagcgcc
acgctgctgattggcgcaacgttgctgctgtttctgtatgcggctggaatttacgcgggg
atgcgctacatgcgccagcgaattatcgagccggcccgccgccgcacgacagcgcttctg
gagcgcgatgcgtttacgcaaaccctcatcgagacagctcccgttggcatggcgatcatc
gatccgttcgaacccgccatggtgatgagcaatccggcgtatgccggcacggtcgatctg
ctgcggcatctgggcgacggtgaactggcgcgcatgtaccggcaattgcacagtggtgtg
gtggcgcgcccggttcggcgtttgctcagtgcgcttgacgacgcgggcgagcgccactat
gcggtgagtttcgttgacacggtgttccgcgagcagccggtgctgatcggcacgctgtcc
gacgtcacggagcaacgccgcttcgaacttgagcaacgcaaggcgcgtcttgctgccgag
agtgccaaccgcgccaaagacgtcttcctgacgacggtgagccatgaaatgcgcacgccg
ctgtatggcacgctggcgtcgatcgaattgctgagtgcgcaaaatctcggtgacgatcat
cgctattacgtcgacgtgatggaaagctcgacacgtaacttgctcgatctcatcaacgat
ctgctcgattattcgcgtattcaggtcggtcgtttcgaattgaattcccgcgactgttcg
ctgctcaaggagctcgaagcggttggattgtcgttcacggggcgtgcgcgattgcagggc
ctcaccctcgattggatgatcgaccctcaactctcacgggcggtccacaccgacgcgctg
cgactgggacaagtcgtcacgaacctcgtcggcaacgccatcaagttcaccgagaaaggt
catgttgcgttcagtgcgatggtctcgcgcgcggacgcgcagggctgcgatgtggtcttt
acggtgagcgacagcggtgtcgggatcgcgtcggctgatttggccgatttgttccggccg
ttcggcaagagcaccaatgagcccggcatgcagcacggcaccggtctgggactggcgatt
tcgcatcagtttgtcggcatgctgggcggggcgttgcaggtcgagagtcaggaaggggcg
ggcaccacgatgcgcttcacgctccatctgccctgggcgccggacagcacggcggtactg
gcaccggccaccggagagacgttcgcttatgtcagcgggctcgttcgccggcattggtat
ctcgatgccctgattcgccgtgccggctacacgccggtgagatacgacgacgccgttgcg
tggtcctccggcagtggccgcatgcaggatgcgggcttgctcatgttcgccgatgagtgg
ccggtacgtggcatggccggcgccgaggtctatttgttgcgtgcgacgcccgtcgatcgt
ctgagcggtagcgcgcccgtctggccgcgcgatatcgcgttgttccagcaggcagagctt
tgggatgcgttgggcacggtgacatcgccgggcgacgccgagagcgaactgacggcatca
gggggtgggagtgcgcgcacgcgcgtcaaaccactggccggttggtacgtgctcgttgcc
gacgatcatccgatcagcggcatgttgctatcgcgccaactggaggggttgggcgcgatg
gtcgattgctatcacgatccgcgtgaggcgctggacgccttcgacgccgagtcgcacatg
ctggtgatcaccgacgcgaacatgccgcatttgtccggacatgcactggccaccgagatc
aaggcgcgtgcgccgcacgtccccgtggtggtggcaacggccgacgtgaccttgcgtcac
gaccgcgaagccgactcgccgttcgatgccgtcgtctacaagccggtcgatgcgcgttct
ttgttgcgcgtcattgaactggtgcgaggtcgttatccatcgctttgcgtcgagattgcg
ccactgcctgcgtcgtcacgcgtgctggaaggagacgcgacggcgcctcccgatacgacg
tcgacgaaggactggcggttgccactgccggaaatgctcgacacgttcgtcaagattgca
gatcaggacattgccaactgccgcactgcgctggccgagttatcgcgggacgagttgcgt
cactcagcgcatcgtctgcgcggtggtttcatggcgtttggcctgagtccgctggcatcg
ctggcggcgcaggtggagcatctggcgccgcaggcatcggcgggacagatggaggctgcg
ttcgacgcgctcgatgcggcatggaatgattggttacgcgcccaagggcaagccattgcc
agcgacgcctga
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