Pandoraea fibrosis: PI93_016065
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Entry
PI93_016065 CDS
T06385
Name
(GenBank) AMP-binding protein
KO
K02182
carnitine-CoA ligase [EC:
6.2.1.48
]
Organism
pfib
Pandoraea fibrosis
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PI93_016065
Enzymes [BR:
pfib01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.48 carnitine---CoA ligase
PI93_016065
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QHF13985
LinkDB
All DBs
Position
complement(3662238..3663866)
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AA seq
542 aa
AA seq
DB search
MSMSNVARVAPVNAQLSSHPYTQYFPQRAEGDRLDVVPLLMAGLRGVSAKPVVVFEGEAI
DRARMAARVGAFQAWFAAQGLVPGDRVAVMLGNSAAQVALIYALMLSGLVWVPVNTRLKG
DGIEYLLGHAKPKLLISEPAFAEVLDAGVALAAQQPDHHGTQVVRCLLSEVTAQAAAYTG
SLPVAADVTPASILCIIYTSGTTGAPKGVLFTHRMMRIASEAALRVADAHDGDRLFLWEP
LCHIGGAQMLLLPFLVDVEMHVVERFSASRFWQQCAAAQATHLHYLGGILDILMQLPPEA
QPAQNSLRVAWGAGVSASAWQATQARLQCTLRECYGMTECSSFATLNDADMPGSIGHALP
WLTLELLDDAGQPVADGEPGEIVLSSEVEGVFLPGYLDNPEATSKALRDGKLFTGDSARR
SADGSLVFIGRRTDSMRVRGENVSAWEIERVFARHPAVAACAAIGIASDIGEQDVMLYVQ
FRDGETVDWPVLSQWAADKLASYQRPRYYRETARFETTPSERIRKHLLSRETGGAWEMTA
AK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgtcgaacgttgcccgagttgcgccggtgaatgcgcagttgtcttctcatccc
tatacgcagtactttcctcagcgggccgagggtgaccggctcgatgtcgtgcccttgctc
atggcgggcctgaggggggtgtcggccaaacccgtcgtcgtgttcgagggggaggccatc
gaccgtgcccggatggcagcgcgcgtgggcgcctttcaggcgtggttcgcggcgcaaggc
ctcgtgcccggcgaccgcgtcgccgtcatgctgggtaacagcgcggcgcaggtggcgctg
atctatgcgctcatgctctccgggctggtgtgggtgccggtcaacacacgtctgaagggc
gatgggatcgaatatctcctcggccatgccaagccgaagttgcttatctcggaacctgcc
ttcgccgaagtgctggacgccggcgtggcactggcagcgcagcaaccggatcatcacggc
acgcaggtcgtgcgttgcctgctatccgaggtgacggcgcaagctgccgcgtatacgggc
agcttgccggtggcggcagacgtcacgcccgcgtcgatactgtgcatcatctacacctcg
ggcacgacgggggcgcccaaaggggtgctgttcacgcaccgtatgatgcgtattgccagc
gaggctgcgctgcgcgtcgccgatgcgcacgatggtgaccggctgttcctgtgggaaccg
ttgtgccatatcggtggcgcacagatgttgttgcttccgttcctcgtcgatgtcgaaatg
catgtggtggagcgattctccgcaagccgcttctggcagcaatgcgcggccgcgcaggcg
acgcatctgcactacctcggcggtattctcgacatcctcatgcaattgccgcccgaggcg
cagccggcgcagaactccctgcgcgtggcatggggtgcgggcgtttccgcaagcgcgtgg
caggccacgcaggcgcgcttgcagtgcacgttgcgcgagtgttacggcatgacggagtgt
tcgagcttcgctacgctcaacgacgccgacatgcccggctcgatcggccacgcgttaccc
tggctgacgctggagctgctcgacgatgccgggcaaccggtcgccgacggggaaccggga
gagatcgtgctctcgagcgaggtggagggggtgttcctgccgggctacctcgacaatccc
gaagccacgtcgaaggcgttgcgcgacggcaagctctttaccggggacagtgcacggcgc
agtgccgacgggagtctggtcttcatcggccgtcgcacggacagcatgcgtgtgcggggc
gagaacgtgtccgcctgggagatcgagcgcgtgttcgcacgacatccggcggtggctgcg
tgcgccgccatcggtatcgcgagcgatatcggcgagcaggacgtgatgctctacgtgcag
ttccgcgacggcgagaccgtcgactggccggtgctctcgcagtgggctgccgacaagctc
gccagctaccagcggccacgctactatcgcgagacggctcgcttcgagaccacaccgtcg
gaacgcattcgcaagcacctgctttcccgcgagacgggtggggcatgggagatgacggcg
gcgaaatga
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