Pandoraea fibrosis: PI93_016145
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Entry
PI93_016145 CDS
T06385
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib00630
Glyoxylate and dicarboxylate metabolism
pfib00680
Methane metabolism
pfib01100
Metabolic pathways
pfib01120
Microbial metabolism in diverse environments
pfib01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PI93_016145
09102 Energy metabolism
00680 Methane metabolism
PI93_016145
Enzymes [BR:
pfib01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
PI93_016145
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_10
Fer4_21
Fer4_6
Fer4_9
Fer4_Nqo3
Fer4_15
Fer4_2
Fer4_16
Fer4_4
Fer4_NDSU1
Motif
Other DBs
NCBI-ProteinID:
QHF14000
LinkDB
All DBs
Position
complement(3679655..3682540)
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AA seq
961 aa
AA seq
DB search
MIHSNAHVTPGHGPDMGTPLRESEVDVTLEIDGQRVTVPAGTSIMRAAAGHDVNIPKLCA
TDSLEPFGSCRLCLVEIEGRRGFPASCTTPVEPGMKVRTQSPKLQDLRRNVMELYISDHP
LDCLTCAANGDCELQDMAGVTGLREVRYGFEGDNHIKSAKDESNPYFTYDPSKCIVCNRC
VRACEETQGTFALTISGRGFEARVSAGQDQPFMESECVSCGACVAACPTATLQEKSVIEM
GQPEHAVVTTCAYCGVGCAFKAEMKGGEVVRMTPYKDGLANEGHACVKGRFAWGYATHKE
RITKPMIRSKITDPWREVSWDEALDYAASEFRRIQAKHGRDAIGGITSSRCTNEETYLVQ
KLVRAAFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQTFKSIEHTDVILVMGANPSDGH
PVFASRLKRRVREGAKLIVIDPRRIDIVDGPHVKAAYHLPLRPGTNVAMVNALAHVIVTE
GLLAEAFIAERCEDRAFAQWREFVALPENSPEAVSVVTGVPAERIRGAARLYATGGNAAI
YYGLGVTEHSQGSTTVMGIANLAMATGNVGREGVGVNPLRGQNNVQGSCDMGSFPHELPG
YRHVSDTLVREQFEAAWGVTLQAEPGLRIPNMFDAAIHGSFKGLYCQGEDIVQSDPNTQH
VAAAMEAMECIVVQDIFLNETAKYAHVLLPGTTFLEKDGTFTNAERRISRVRRVMAPLPG
MADWEVTIALAKRLGYDMPYSHPSQIMDEIARLTPTFHGVSYARLDEAGSLQWPCNDDAP
DGTPIMHVDAFVRGKGRFIITRYVPTDEKVTPRYPLLLTTGRILSQYNVGAQTRRTHNVH
WHDEDRLEIHPHDAQERGIKDNDWVGIRSRAGETVLRAVLSERMQPGVVYTTFHFPESGA
NVITTDNSDWATNCPEYKVTAVQVLPVVQPSAWQAKYSTFNRTQLELLDAARTSSEPVPA
K
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgatccattcgaacgcacacgtcacgccgggccacggcccggacatgggcacgccgctg
cgcgagagcgaagtcgacgtcacgctggaaatcgacggtcagcgcgtaacagtgccggcc
ggcacgtcgatcatgcgcgccgccgccggtcacgacgtcaacatcccgaagctctgcgcg
acggactcgctggagccctttggttcctgccggctctgccttgtcgagatcgaggggcgg
cgcggttttcccgcgtcgtgcacgacccctgtcgaaccgggcatgaaggtgcgcacgcag
tcgcccaaattgcaggatttgcgacgcaacgtgatggagctttacatctccgatcacccg
ctcgattgcctgacctgcgcggccaacggggactgcgagttgcaggacatggcgggcgtg
accgggttgcgcgaggtgcgttatggcttcgaaggcgacaaccacatcaagagcgccaag
gacgagtcaaatccgtacttcacgtatgacccgtcgaaatgcatcgtctgcaatcgctgt
gtgcgggcgtgtgaagagacccagggcacctttgcgctgacgatttccggccgtggcttc
gaggcgcgggtctcggccgggcaggatcagccgttcatggaatcggagtgtgtgtcgtgc
ggcgcgtgcgtggcggcctgcccgacggcaacgcttcaggagaagagcgtcatcgagatg
ggccagccggagcacgcggtcgtgacgacgtgcgcgtactgcggcgttggctgcgcgttc
aaggcggaaatgaagggtggcgaagtcgtgcgcatgacgccttacaaggacggcctcgcc
aacgaggggcacgcctgcgtgaagggacgctttgcgtggggctatgccacgcacaaggag
cgcatcaccaagccgatgatccgcagcaagatcacagacccttggcgagaagtgtcgtgg
gacgaggcgctggattatgccgcgtcggagttccggcgcattcaggcaaagcacgggcgt
gacgccatcggtggcatcacctcgtcgcgttgcacgaatgaagagacgtacctcgtgcag
aagctcgtgcgcgcggcgttcggcaataacaacgtcgatacctgcgcgcgggtatgccat
tcgccgacgggctatggcctgaagcagacgctgggcgagtcggccggcacgcagaccttc
aagtccatcgagcacaccgacgtcattctggtgatgggcgccaacccatcggacgggcat
ccggtcttcgcgtcgcggctcaagcggcgggtgcgcgaaggcgcgaagctgatcgtgatc
gatccgcgccgcatcgatatcgtcgacgggccgcatgtgaaggcggcgtatcacctgccg
ctgcgtcccggcaccaatgtcgcgatggtgaatgcactcgctcatgtcatcgtcacggaa
gggttgttggccgaggctttcatcgccgagcgatgcgaagaccgcgcatttgctcagtgg
cgcgagttcgtggcgttgccggaaaattcacccgaggcggtgtcggtcgtcaccggggtg
cccgccgaacggattcgtggcgcggcccggttgtacgcgacgggtggcaatgcagcgatc
tattacgggctgggggtgacggagcactcgcaaggctccacgaccgtgatgggcattgcg
aatctggcgatggctacgggcaacgtcgggcgcgagggcgtgggcgtgaacccgctacgc
gggcagaacaacgtgcaggggtcgtgcgacatggggtcgttccctcacgagttgcccggc
taccggcatgtctccgatacgttggtgcgggagcaattcgaagcggcgtggggcgtcacg
ctgcaggcggagccgggcttgcgcatcccgaatatgttcgacgcggcgattcacggtagt
ttcaaggggctttactgccagggcgaggacatcgtgcagtccgacccgaacacgcagcac
gtggcggcggccatggaggcgatggagtgcattgtcgtgcaggacatcttcctgaacgag
accgccaagtacgcgcacgtcctgctgccgggcacgacgttcctcgaaaaggacggcacc
ttcaccaacgccgaacggcggatctcccgtgtacgccgtgtcatggcgccgctgccgggc
atggccgattgggaagtgacgattgcgcttgcgaaacggctggggtacgacatgccgtac
tcacacccctcgcagatcatggacgagatcgctcggctcacgccgacgttccacggtgtg
agctacgcacgtctcgacgaggcgggcagcctgcaatggccgtgtaacgacgacgcgccc
gatggcacgccgatcatgcacgtggacgcgttcgtgcgcggcaaggggcgcttcatcatc
acgcgctacgtgccgaccgacgagaaggtcacgccgcgctatccgctgttgctcaccacg
gggcgtatcctctcgcaatacaatgtgggcgcgcagacgcgtcgcacgcacaacgttcac
tggcacgacgaagaccggctcgaaatccacccgcacgatgcgcaggagcggggaatcaag
gataacgactgggtcggcatccggagccgggcgggcgagacggtactgcgcgcggtgctc
agcgagcgcatgcagccgggtgtggtgtacacgacgttccatttccccgagtcgggggcg
aacgtgattacgactgacaactcggactgggcgaccaattgtcccgagtacaaggtgacg
gccgtgcaggtgctgcccgtggtgcagccctcggcatggcaggccaaatactcgacgttc
aaccgcacgcagctcgaattgctcgatgcggcccgcacgtcttccgagccggtgccggcg
aagtag
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