Pandoraea fibrosis: PI93_016630
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Entry
PI93_016630 CDS
T06385
Name
(GenBank) pseudouridine synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
pfib
Pandoraea fibrosis
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfib03009
]
PI93_016630
Enzymes [BR:
pfib01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
PI93_016630
Ribosome biogenesis [BR:
pfib03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PI93_016630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QHF14086
LinkDB
All DBs
Position
3792505..3794184
Genome browser
AA seq
559 aa
AA seq
DB search
MSDTPRAKLGAKHPRTLDKTRAPVRSSGALRRPTKAVPASMLDASGAKKKPAAKPPRPRP
ANDATSPAGARRSADGGTAPRKPATGAAKPYEKRPTGERPPARGQRERVAGARPARFDDE
SRSRRFDEDRPRRITEGGARGDFSRPPQRGTNDRAPRRFDEDRPRRTTEGGARGDYSRPP
QRGTNDRAPRRFDEDRPRRTTEGGARGDYSRPPQRGTNDRAPRRFDEDRPRRTTEGGARG
DYSRPPQRGTNDRAPRRFDEDRPRRDGEGAPRGRFARDDRNAQAPRSTRPARATRDDDDD
IKVHHDAAGSLRLSKRMSELGLCSRREADEWIAKGWVRVDGKVMTELGTKILPTQEITVV
QAARKEQANRVTILLHKPVGYVSGQAEDGYEPAVVLVTRENHWSEDDAGVRFSPTHLRSL
APAGRLDIDSTGLLVLTQDGRIAKQLIGEDSDIEKEYLVRVSYNEHEQNVEAHFPAERLA
LLRHGLGLDDQPLKPAQVEWQNPEQLRFVLKEGKKRQIRRMCELVGLHVTGLKRVRMGRI
TLGNLPVGEWRYLRAGEGF
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataccccgcgcgccaaactcggcgccaaacatccccgcactctcgacaagacc
cgcgcgcccgtgcggtcgtccggcgcgctgcgccgtccgaccaaggcggtgccggcgtcg
atgctcgacgccagcggcgcgaagaagaagcctgcggcgaaaccgccccgcccgcgtccg
gcaaacgatgccacgtcgccggccggcgcacgtcgctcggcagatggcggcaccgcaccg
cgcaaacccgcgactggcgcagcaaaaccctacgagaaacgcccgacgggtgaacgtccg
ccggcgcgcggccagcgcgagcgcgttgcaggcgcacgccccgcgcgatttgacgatgag
tcccgctcgcgtcgcttcgacgaagaccgcccgcgtcgcattaccgaaggtggtgcacgt
ggcgacttttcccgcccgccccaacgtggcacgaatgatcgcgctccgcgtcgcttcgac
gaagatcgtccgcgccgtactaccgaaggcggtgcacgtggcgactattcccgtccgccc
caacgtggcacgaatgatcgcgctccgcgtcgctttgacgaagatcgtccgcgccgtact
accgaaggcggcgcacgtggcgactattcccgtccgccccaacgtggcacgaatgatcgc
gcaccccgtcgcttcgacgaagatcgtccgcgccgcactaccgaaggcggtgcacgtggc
gactattcccgtccgccccaacgcggcacgaatgatcgcgcaccgcgtcgctttgacgaa
gatcgtccccgtcgcgatggtgaaggcgcgccgcgtggccgcttcgcccgtgacgatcgc
aacgcccaggcgccgcgctcgacgcgccccgcacgcgctacgcgtgacgacgacgatgac
atcaaggtccaccacgacgccgccggatcgttgcgtctatcgaagcggatgtcggaactc
ggtctgtgttcgcgtcgcgaagccgatgagtggatcgccaagggatgggtccgcgttgac
ggcaaggtcatgacggagctcggcacgaaaattctgccaacgcaggaaatcaccgtcgtg
caagccgcacgaaaggaacaggccaatcgcgtcaccatcctgctgcataagcccgtaggc
tatgtctccggccaggcggaagacggttacgagccggccgtcgtcttggtcacgcgcgaa
aaccactggtccgaagacgatgccggcgtgcgcttctcgccgacgcatctgcgcagcctg
gcaccggccggtcgcctcgatatcgattccaccggcctgctcgtcctcacgcaggacggc
cgtatcgcgaagcaactgatcggcgaagactcggatatcgagaaggaatatctcgtccgt
gtgtcgtataacgaacacgagcagaatgtcgaggcgcacttccccgccgaacgtctggct
ctgctgcgtcacggcctgggactcgacgatcaaccgctcaagcctgcgcaggtcgaatgg
caaaatccggagcaactgcgcttcgttctcaaggaaggcaagaagcgtcagattcgccgg
atgtgcgaactcgtcggtctgcatgtgactggcctcaagcgcgtgcgcatgggacgcatc
acgctgggcaacctgcccgtgggtgagtggcgttatctgcgcgctggcgaaggcttctga
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