Pandoraea fibrosis: PI93_016700
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Entry
PI93_016700 CDS
T06385
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib00470
D-Amino acid metabolism
pfib01100
Metabolic pathways
pfib01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PI93_016700 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PI93_016700 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfib01011
]
PI93_016700 (alr)
Enzymes [BR:
pfib01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
PI93_016700 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
pfib01011
]
Precursor biosynthesis
Racemase
PI93_016700 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
QHF14100
LinkDB
All DBs
Position
complement(3813362..3814432)
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AA seq
356 aa
AA seq
DB search
MPRPIKVSIHTAALAHNLDVARRSAPNAKVWAVVKANAYGHGIDNAFPGLRDTDGFGLLD
LDEAVRLRELGWAGPILLLEGFFKPEDLAIIDEYGLTTTVHSDEQLRMLETTRLKKPLNI
QLKMNSGMNRLGFSPERYRAAWERARAIPGVSQIVLMTHFSDADGPRGIQYQMEAFERGA
CDVPGERSLANSAATLCFPETHGAWVRPGIMLYGSSPKGLDVPASTFDLQPTMTLESELI
GIQDVPAGGTVGYGSIFTADAPMRVGTVACGYADGYPRVAPTGTPVLVDGVRTRTIGRVS
MDMLSVDLTPVPQARVGSSVTLWGRGVSIDEVAASAGTLGYELMCAVARRVPVHAN
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtccaatcaaagtctcgattcataccgcagcccttgcccacaatctcgatgtc
gctcgccgcagcgcgcccaatgcgaaggtgtgggcggtggtcaaggccaatgcctacggg
cacggcatcgataacgcgtttcccggtttgcgcgacaccgacggcttcggcctgctcgat
ctcgacgaagctgtgcgtttgcgcgaactcggctgggccggtcccatcctgttgctcgaa
ggttttttcaagccggaggatctggcgattatcgacgagtacggtttgacgaccaccgtc
cacagcgacgaacagttgcgcatgctggagacgacgcgtctgaaaaaaccgctcaacatt
cagctcaagatgaattccggtatgaatcgccttggcttctcccccgagcgctaccgcgcg
gcgtgggagcgcgcccgcgcgattcctggcgtgagtcagatcgtattgatgactcacttt
tccgatgcggacggcccgcgcgggatccagtatcagatggaagcgttcgagcgcggcgcc
tgcgacgtgccgggagagcgcagccttgcgaactccgccgccacgctgtgctttcccgag
acacatggcgcgtgggtccgtccgggcatcatgctctacggctcgtcgcctaagggactc
gacgtcccggcgtcgacattcgatctgcaaccgacgatgacgcttgaatccgaattgatc
ggcattcaggacgtcccggcgggcggcacggtcggctacggcagcatctttaccgccgac
gccccgatgcgcgtggggacggtggcgtgtggctatgctgacggttatccgcgcgttgcc
cccaccggcacgccggtgctcgtcgacggcgtgcgcacgcgcacgattggccgcgtgtcg
atggacatgctgtctgtcgatctcacgccggtgccgcaggcacgcgtggggtcgtccgtc
acgctgtggggccgtggggtgagcattgacgaggtggctgcttcggccggcacgttgggc
tacgaattgatgtgcgccgtggcgcggcgtgtgcccgtgcacgcgaactaa
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