Pandoraea fibrosis: PI93_017055
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Entry
PI93_017055 CDS
T06385
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pfib
Pandoraea fibrosis
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfib03016
]
PI93_017055 (truB)
Enzymes [BR:
pfib01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PI93_017055 (truB)
Transfer RNA biogenesis [BR:
pfib03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PI93_017055 (truB)
Prokaryotic type
PI93_017055 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QHF15840
UniProt:
A0A5E4XE02
LinkDB
All DBs
Position
complement(3888654..3889640)
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AA seq
328 aa
AA seq
DB search
MTDPRSQAPRQKLPRFALDGVLLLDKPLGLSSNDALIKAKRLLQALKAGHTGTLDPLATG
LLPLCFGEATKFSQDLLEADKTYEARVRLGETTTTGDAEGEVLLTRPVTVDEAAIRAVLP
RFTGPISQVPPMYSALKRDGKPLYEYARAGQTLEREAREVTIHLLEVTACALPDAAEFTL
RVTCSKGTYVRTLAEDIGEALGCGAHLRALRRTAVGPLTLDGALTLEALAALDHAQRVAA
LAPVDALLKTLPTIWLDETLARRFAHGQRLRLDETRCPQPLRECAAGHDDIEVKVYAEAV
GDAPVRLLGVARLDAQALLTPQRLLKTQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacggacccgcgttcgcaggcaccccgccaaaaactccctcgtttcgcccttgatggc
gtgttgctgctggacaagccgctgggcttgtcgtccaacgacgcactgatcaaagccaag
cgcctgttgcaggcattgaaggccgggcatacgggcacgctcgacccgttggcgaccggt
ttgttgccgttgtgcttcggcgaggcgacgaagttctcgcaggatttgctggaagccgac
aagacttacgaagcgcgtgtgcgtctgggcgaaaccacgacgacgggcgatgcggaaggg
gaggtgttgctcacgcgtcccgtaacggtggacgaagcggcgattcgcgccgtgctgccg
cgctttacgggaccgatctctcaggtgccgccgatgtactcggcgctcaagcgcgacggc
aagccgttgtacgaatatgcgcgcgcaggacagacgcttgagcgtgaagcccgcgaggtc
accatccatctgctggaagtgacggcatgcgccttgcccgatgccgccgagttcaccttg
cgcgtgacatgcagcaagggcacgtatgtgcgcacgctggcggaagacatcggcgaagcg
ctgggctgcggcgcgcatttgcgcgcgctgcggcgcacggcggttggcccgctcacgttg
gatggcgcgctcacgctcgaggcgcttgccgcgctcgatcacgcgcagcgggtggccgcg
ctggccccggtcgatgcccttctgaagacgctaccgaccatctggctcgatgaaacgctc
gccaggcgcttcgcacacgggcagcgtctgcgtctggatgaaacacgttgtcctcagccg
ctgcgcgaatgcgccgcgggacatgacgacatcgaggtgaaggtctatgccgaagccgtc
ggcgacgccccggtgcgcttgctcggcgtcgcgcggctcgatgcgcaagcgttgctcaca
ccgcagcgcctgctcaagacgcagtga
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