Pandoraea fibrosis: PI93_017640
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Entry
PI93_017640 CDS
T06385
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21602
IclR family transcriptional regulator, regulator of plant utilization
Organism
pfib
Pandoraea fibrosis
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfib03000
]
PI93_017640
Transcription factors [BR:
pfib03000
]
Prokaryotic type
Helix-turn-helix
IclR family
PI93_017640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HVO_A0261_N
HVO_A0114
Dimerisation
Sigma54_DBD
HTH_24
SMC_Nse1
HTH_20
WHD_DprA
Crust_neuro_H
HTH_26
DUF8612
Motif
Other DBs
NCBI-ProteinID:
QHF14267
UniProt:
A0A5E4TEY1
LinkDB
All DBs
Position
4008641..4009468
Genome browser
AA seq
275 aa
AA seq
DB search
MKDESSQGAESRTSIQVIERMMRLLDALAGHADPVSLKELAHATELHPSTAHRILNDMVA
CRFVDRCDPGTYRLGMRLLELGNLVKARLSVRDAALSPMRGLHRITGQTVNLSVRQGDEI
VYIERAYSERSGMQVVRAIGGHAPLHLTSVGKLFLAADEAARVRAYATRTGLSGHTRNSI
TDLQKLERELNHVRKSGYARDNEELELGVRCIAAGIYDDSGKLVAGLSLSAPADRLQDAW
LVNLNETALLISASLGFHSPNPDAGGSPSQIATAE
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgaaagcagtcaaggcgcagagtcgcgcacgtccattcaggtgatcgagcgc
atgatgcgtctgctcgatgcacttgccggccatgccgaccccgtcagtctcaaggaattg
gcgcacgccaccgaacttcatccgtcgaccgctcaccgcatcctgaacgacatggtggcg
tgccgttttgtcgatcgctgtgacccgggtacgtatcgcctcggcatgcgtctgctcgaa
ctcggcaatctggtcaaagcgcggctgtcggtgcgcgacgccgctctctcgccgatgcgc
ggcctgcaccgcatcaccggacaaacggtcaatctatcggtacgtcagggcgatgagatc
gtctacatcgaacgcgcctacagcgagcgctcgggcatgcaggtggtacgcgccatcggc
ggtcatgcgcccttgcatctcacgtcggtcggcaagctcttcctcgccgccgacgaagct
gcgcgcgtgcgcgcctacgcgacgcgcacgggtctgtcgggacatacgcgcaacagcatc
accgatctgcaaaaactcgaacgcgagttgaatcacgtgcgcaaatcgggctatgcgcgc
gataacgaagaactcgagctgggcgtgcgatgcattgcggcggggatttacgacgatagc
ggcaagctcgttgcagggctctccctttctgcgcccgccgatcgcttgcaggatgcatgg
ctcgtcaatctgaacgagaccgcgttactcatttcagcgtcgctcggctttcactcgccg
aaccccgacgcggggggcagcccctcgcagatcgctacggccgagtaa
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