Pandoraea fibrosis: PI93_017670
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Entry
PI93_017670 CDS
T06385
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib00010
Glycolysis / Gluconeogenesis
pfib00020
Citrate cycle (TCA cycle)
pfib00260
Glycine, serine and threonine metabolism
pfib00280
Valine, leucine and isoleucine degradation
pfib00310
Lysine degradation
pfib00380
Tryptophan metabolism
pfib00620
Pyruvate metabolism
pfib00630
Glyoxylate and dicarboxylate metabolism
pfib00640
Propanoate metabolism
pfib00670
One carbon pool by folate
pfib00785
Lipoic acid metabolism
pfib01100
Metabolic pathways
pfib01110
Biosynthesis of secondary metabolites
pfib01120
Microbial metabolism in diverse environments
pfib01200
Carbon metabolism
pfib01210
2-Oxocarboxylic acid metabolism
pfib01240
Biosynthesis of cofactors
Module
pfib_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfib_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pfib_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pfib_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
PI93_017670 (lpdA)
00020 Citrate cycle (TCA cycle)
PI93_017670 (lpdA)
00620 Pyruvate metabolism
PI93_017670 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
PI93_017670 (lpdA)
00640 Propanoate metabolism
PI93_017670 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PI93_017670 (lpdA)
00280 Valine, leucine and isoleucine degradation
PI93_017670 (lpdA)
00310 Lysine degradation
PI93_017670 (lpdA)
00380 Tryptophan metabolism
PI93_017670 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PI93_017670 (lpdA)
00670 One carbon pool by folate
PI93_017670 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfib04147
]
PI93_017670 (lpdA)
Enzymes [BR:
pfib01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
PI93_017670 (lpdA)
Exosome [BR:
pfib04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
PI93_017670 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_oxidored
GIDA
Pyr_redox_3
NAD_binding_8
GCV_H
FAD_binding_2
Biotin_lipoyl_2
Thi4
FAD_binding_3
AlaDh_PNT_C
HI0933_like
RnfC_N
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
QHF14272
LinkDB
All DBs
Position
complement(4015314..4017092)
Genome browser
AA seq
592 aa
AA seq
DB search
MSLIEVKVPDIGAEGVDVIEVMIKPGDKIAKEASLITLESDKASMEVPSEVSGTVKEVKI
KVGDKASQGTLIALIEADDAGAGKSATPAAAPAPAAPSAPAAAPAAQPSAPAPAVAKHSG
GADTECDVLVLGAGPGGYSAAFRSADMGRKTVLVERYATLGGVCLNVGCIPSKALLHTAA
VLEEAQSLGHHGISFGKPEVDLDKLRAYKESVVGKLTGGLAGMAKMRKVEVVRGVGTFLD
PNHIEVVAEDGSKRTVKFAQAIIAAGSQAVKLPFLPEDPRIVDSTGALELRQLPKKMLVI
GGGIIGLEMATVYSALGTEIDVVEMLDGLMQGADRDLVKVWEKMNAKRFGRVMLKTKTVG
AEAKPDGIYVKFEGEAAPAEPQRYDLVLVAVGRSPNGKKIGAERAGVSVGDRGFISVDKQ
MRTNVPNIFAIGDIVGQPMLAHKAVHEAHVAAEAAAGEKAYFDAIQIPSVAYTDPEVAWA
GKTEDQLKAEGVKYGKAVFPWAASGRAIANGRDEGFTKLLFDEETHRIVGGAIVGTHAGD
LIGELCLAVEMGADAVDIGKTIHPHPTLAESIGMAAEIYEGVCTDVPPARKK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcatcgaagtcaaagtgccggacatcggcgcagagggcgtggatgtcatcgaa
gtgatgatcaagcccggcgacaagatcgccaaggaagcgtcgctcatcacgctggagtcc
gacaaggcttccatggaagtgccgtccgaagtgtcgggcacggtcaaggaagtgaaaatc
aaggtgggcgacaaggccagccaaggcacactgatcgcgcttatcgaagccgatgacgcg
ggtgccggcaagtcggcaacccccgcggctgcgcccgcgccggccgccccttcagcacct
gcggccgctcccgcagcgcaaccgagcgccccggcgccggccgttgccaagcacagtggt
ggcgcagacaccgagtgcgatgtgctcgtgctgggtgccggtccgggcggatactccgcg
gctttccgcagtgccgacatgggtcgcaagacggtcctcgtcgagcgctacgcaacgctt
ggcggcgtttgcctgaacgtgggttgcatcccctcgaaggcattgctccacacggcggca
gtcctcgaagaggcgcaatcgctgggccatcacggtatctcgttcggcaagccggaagtc
gatctcgacaagctgcgtgcctacaaggaaagcgtcgttggcaagctcacgggcggtctg
gccggcatggccaagatgcgcaaagtggaagtcgtgcgcggcgtgggcacgttcctcgat
ccgaatcacatcgaagtcgtggccgaagacggcagcaagcgcacggtgaagtttgcacaa
gcgatcatcgctgcgggttcacaagcagtgaagctgccgttcctgccggaagatccgcgc
atcgtcgactcgaccggcgcactcgaactgcgtcaactgccgaagaagatgctggtcatc
ggtggcggcatcatcggcctcgaaatggcgacggtctatagtgccctggggaccgagatc
gacgtcgtggaaatgctcgatggcctgatgcaaggtgcggatcgcgatctggtcaaggtc
tgggaaaagatgaacgcgaagcgttttggccgcgtcatgctcaagaccaagacggtgggt
gccgaggccaagccagatggcatctatgtgaagttcgagggcgaggccgcgccggccgag
ccgcaacgctacgatctggtgctcgtcgctgtgggccgtagcccgaacgggaagaagatc
ggtgccgagcgcgccggcgtgtcggtgggcgatcgcgggttcatctccgtcgacaagcaa
atgcgcaccaacgtgccgaacatcttcgcgatcggcgatatcgtgggacagccgatgctt
gcccacaaggccgtgcacgaagcgcacgttgccgccgaagcggccgcaggcgagaaggcg
tacttcgatgcgatccagattccgtcggtggcctacaccgatccggaagtggcctgggct
ggcaagacggaagaccaactgaaggcggaaggcgtgaagtacggcaaggcagtgttcccg
tgggccgcctcgggccgtgcgattgccaatggccgtgacgaaggcttcaccaagctgctg
ttcgacgaggagacgcatcgcatcgttggcggcgcgatcgtcggtacccatgccggggat
ctgatcggtgaattgtgtctggccgtcgaaatgggcgcagacgctgtcgacatcggcaag
acgattcatccgcacccgacgctggccgaatcgatcggcatggccgcggagatttacgaa
ggggtttgcaccgacgtaccgccggctcgcaagaagtag
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