Pandoraea fibrosis: PI93_018265
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Entry
PI93_018265 CDS
T06385
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib00020
Citrate cycle (TCA cycle)
pfib00190
Oxidative phosphorylation
pfib00650
Butanoate metabolism
pfib00720
Other carbon fixation pathways
pfib01100
Metabolic pathways
pfib01110
Biosynthesis of secondary metabolites
pfib01120
Microbial metabolism in diverse environments
pfib01200
Carbon metabolism
Module
pfib_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfib_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pfib_M00149
Succinate dehydrogenase, prokaryotes
pfib_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PI93_018265
00650 Butanoate metabolism
PI93_018265
09102 Energy metabolism
00190 Oxidative phosphorylation
PI93_018265
00720 Other carbon fixation pathways
PI93_018265
Enzymes [BR:
pfib01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PI93_018265
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
FAD_binding_3
Thi4
GIDA
Pyr_redox_3
FAD_oxidored
NAD_binding_8
NAD_binding_7
P-II
Lycopene_cycl
ThiF
Motif
Other DBs
NCBI-ProteinID:
QHF14375
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Position
complement(4150324..4152099)
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AA seq
591 aa
AA seq
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MAAIKNSLPRRRFDVVIVGAGGSGMRASLQLAKAGLSVAVLSKVFPTRSHTVAAQGGIGA
SLGNMSEDNWHYHFYDTIKGSDWLGDQDAIEFMCRQAPNAVYELEHFGMPFDRNPDGTIY
QRPFGGHTANYGEKPVQRACAAADRTGHALLHTLYQQNVAAKTHFFVEWMALDLIRNEEG
DVLGVSALELETGDVYLLEGKCTLFATGGAGRVYNASTNAFINTGDGLGMAARAGIPLED
MEFWQFHPTGVAGAGVLITEGVRGEGGILRNSNGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGCGPNGDYVLLDLSHIGAETIMKRLPSIREIALKFANVDAIKEPIPVVPTIHYQ
MGGIPTNYHGQVVLQKNGESTPVNGFYAVGECSCVSVHGANRLGTNSLLDLVVFGRAAGN
HIVDFVKGHGDHKPLPADAGENALARLARLEASSSGEYAQDIANDIRATMQKHAGVFRTS
ALLKEGVDEIKQVAERVSSVHLKDKSKVFNTARMEALEVDNLIEVAKATMIAAEARKESR
GAHAHSDYPERDDANWMRHSLFFSEGNRLDYKPVQLKPLTVDSVPPKARTF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaattaaaaattcgctgccgcgccgccgctttgacgtagtcatcgtgggcgca
ggtggttcgggcatgcgcgcttcgctgcaactggccaaggccggtctgtcggtggccgtg
ctgtccaaggtgttccccacccgttcgcataccgtggccgctcagggcggcatcggtgct
tcgctcggcaacatgagcgaagacaactggcattaccacttctacgacacgatcaagggt
tccgactggctcggcgaccaggacgcgatcgagttcatgtgccgtcaggcaccgaacgcc
gtctacgagctggaacacttcggcatgccgttcgaccgtaacccggacggcacgatttac
cagcgcccgttcggcggccacacggccaactacggcgagaagcctgtccagcgcgcttgc
gcggccgctgaccgtaccggtcacgctctgctgcacacgctgtaccagcagaacgtggca
gccaagacccacttcttcgtggagtggatggcgctcgatctgatccgtaacgaagagggc
gatgtcctcggcgtgtcggcactggaactcgaaaccggcgacgtctacctgctcgaaggc
aagtgcacgttgttcgcgaccggcggtgccggccgtgtgtataacgcatcgaccaatgcg
ttcatcaacaccggtgacggcttgggcatggccgcgcgtgcgggcatcccgctcgaagac
atggaattctggcaattccacccgaccggcgtggccggcgcgggcgtgctgatcacggaa
ggtgtgcgcggcgaaggcggtattctgcgcaattcgaacggcgagcgcttcatggagcgc
tatgccccgacgctgaaggatctggcgccgcgtgacttcgtgtcgcgctcgatggaccag
gaaatcaaggaaggccgtggttgcggcccgaacggcgactacgtgctgctcgacctctcg
cacatcggtgccgagacgatcatgaagcgcttgccgtcgattcgcgaaatcgcgctgaag
ttcgccaacgtcgacgcgatcaaggaaccgatccccgtcgtgccgaccatccactatcag
atgggcggtattccgacgaactaccatggtcaggtcgtcttgcaaaagaacggcgaatcg
acccccgtcaacggcttctacgccgtgggtgagtgctcgtgcgtgtcggtgcacggggca
aaccgtctgggcaccaactcgctgctcgacctcgtggtgttcggccgtgcggccggcaat
cacatcgtcgacttcgtgaagggtcacggcgaccacaagccgctgcccgccgacgccggc
gagaatgcactggcgcgtctggcacgtctggaagcctcgagctcgggcgagtacgcgcag
gacatcgccaacgacatccgtgcaacgatgcagaagcacgctggtgtgttccgtacctcg
gcgctgctcaaggaaggcgtggacgaaatcaagcaagtggccgagcgcgtgtcgagcgtc
cacctgaaggacaagtcgaaggtgttcaacacggcgcgtatggaagcgctggaagtggac
aacctgatcgaagtggccaaggccaccatgatcgcagccgaggcccgcaaggaaagccgt
ggggcgcacgcgcacagcgactatccggagcgcgacgacgcgaactggatgcgccattcg
ctgttcttcagcgaaggcaaccgtctggattacaagccggtgcagttgaagccgctgacc
gtcgactcggttccgcccaaggcgcggacgttctaa
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